« Back to Papaver somniferum search


Detailed information on CNT30411826


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FK62|SAU24_ARATH, E-value = 4e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315096Papaver somniferumCorylus avellana7.2620.2284.9373forward
CNT30560988Papaver somniferumActinidia chinensis11.2421.0482.3113forward
CNT30655496Papaver somniferumRosa chinensis5.9720.8386.6760forward

Expression of CNT30411826

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MKVMSSFLPFEDERRIIFAAKLNPILRIYIRSKRTKNKVS*

>peptide 2 (30 aa)
MKYYSSKISELRISIWIESHRHKLLNALWV*

Sequence

>CNT30411826
TATCAACCTTATTTTTAGTCTTTTCAGTCACTTTGCCAAGTACTTGATAAGAGCAGGTAAGATCATTCGTGTACAATAAAATATACAAAAGTGTTCCTAT
TTTTTTTTCATAAAAGAGGGGTAAAACTTCAGAACAATACAAGTGTTCCTTCTCATTGAGAAATGTAACAATTAATTGAAGTAAGTAAATATTCACACAA
GATCTAATTAATGACTAGCCTAAAGTTGCAAAATTGGAGAGACATCTCAATATAATTTGTTTGATTAAAAACTGTTTAATCCAGAAGTGAGATCAAGGAA
TGTGTCTTCATCGCAAGGAATTGTAAGACCACCCATTGGATGATCAAACCCATACTCTTCCTCTGCTCCGCTTAGAAGTTGTTGGAATGAAGTATTATTC
AAGTAAGATATCGGAACTACGAATCTCTATTTGGATTGAGTCTCACCGACATAAACTGCTAAATGCCCTTTGGGTATGAAGGTCATGTCATCATTTCTTC
CTTTTGAAGATGAACGTCGGATAATCTTTGCAGCTAAACTGAATCCCATCTTGAGAATATATATTAGGAGCAAGAGAACTAAGAACAAGGTTTCTTAAGT
AGAAGGCTAGATGATCAACGAGAGAGAGAAAGTGTTAAGAAATACCATGAAAACTCTGTAACTTTGGATGTTTTATTGAAATGCTTGAGAGCATATATAT
AGGAGACTAGGATGAGGGAAGTTAATGCGGAAATGAAATGAGTGACGATGAAAGAGTTGTCTTTGAACGAAAGGTGGGCTCATTATACGACGGATTTCAC
ATGAAATTGTTGCCTTGATCAATATCAACAACTTGTGGTCATCATTACTTAATCACAGTTTGTAGTTAAGATAAGAGGACCTAGGGACTTGCTGATCAAT
AACGGATAGACCTCGAATTTGATACTTGATCTATAATTCCAAAGGCATCTTGTACTAATTGATTGGCCATTCAAATCTAATCTTTGATCTTAAACTGAGT
TTGAG