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Detailed information on CNT30411806


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 2e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094104Papaver somniferumSolanum tuberosum44.8949.4978.97290forward
CNT30599104Papaver somniferumFraxinus excelsior9.9120.3285.9464forward

Expression of CNT30411806

Peptides detected in this lncRNA

>peptide 1 (88 aa)
SFWFSKLPRASANSASNFFLPSAICASTSTVVSFFIWFKAAAISALAALMIAAACSSNSFTSLDVSLTLFNFPLISASLASIKLPNGV*

>peptide 2 (46 aa)
PPSGSPNYQELQLIQLPISSFLLPSVLQLPQLFLSSSGSKQLQFQL*

>peptide 3 (60 aa)
MRNSAMISGRVRLKSNNAAFSISAASDGGAIVRTAAAIAAVDLREFRFRVGVLILLLLLV*

Sequence

>CNT30411806
CCTCCTTCTGGTTCTCCAAATTACCAAGAGCTTCAGCTAATTCAGCTTCCAATTTCTTCCTTCCTTCTGCCATCTGTGCTTCAACTTCCACAGTTGTTTC
TTTCTTCATCTGGTTCAAAGCAGCTGCAATTTCAGCTCTAGCTGCTCTCATGATAGCAGCAGCTTGTTCATCCAATTCCTTCACTTCACTAGATGTATCT
TTAACACTGTTTAATTTCCCTCTAATATCTGCATCTCTTGCATCCATAAAGTTACCCAATGGAGTGTAGTAAATCTTGTCTAAAGCAAACATAAGTATGA
GGAATTCTGCCATGATTAGTGGTAGAGTAAGATTGAAATCAAACAATGCTGCTTTCTCAATTTCTGCTGCTAGTGATGGTGGAGCCATTGTTAGAACTGC
TGCTGCAATTGCAGCTGTTGACTTGAGAGAGTTTAGGTTTAGAGTTGGGGTTTTGATTTTGTTGCTGCTGCTGGTTTGATTGGCTTGGCTTCGGATTTTT
AGGGTTGTGAATTGGGGGAATTTGAGTGCTTTTGGTGTTGATTGGATTGAAGGAGATGTGATTAGGGTTTTGGATGAGGAAGCCATGATCATGTTTGCCA
TCACTGTGATTAAACCAGTTACTGGTTTTCTCCTTCTCACACTTTT