Detailed information on CNT30411768


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30720907Papaver somniferumTriticum spelta34.8210094.811021forward
CNT30148090Papaver somniferumBrachypodium distachyon48.3348.7894.51417forward

Expression of CNT30411768

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MSRRLILQQARGQSPGSSHCMGAYGFMFYFTPRWGFFSPFPHGTTSLSVTQEYLALQGGPC*

>peptide 2 (43 aa)
MSSRLLRLNAFRGEPLALGSSGISPLTTTHPLILQHQSVRTST*

>peptide 3 (39 aa)
MDSAAVRKVDLFGNLRIYAYFQLPEAFRRLLRPSSSLGA*

>peptide 4 (56 aa)
MFALLKPTFSLPLRPHLLARMLPSKAERSPTDAFLHPTASADRLAPFIFGARALDQ*

>peptide 5 (44 aa)
MGVLFTLPSRYYFAIGHPGVFSLARWSLLIHTGFHVPHATRVRA*

>peptide 6 (58 aa)
MINHRSNCRIGKIGCYHIPLYPLSSRAGDKRTRTADIRHRVNHRLSGLPDRFYHRGQR*

>peptide 7 (56 aa)
MFALLKPTFSLPLRPHLLARVLPSKAERSPTDAFLHPTASADRLAPFIFGARALDQ*

>peptide 8 (80 aa)
MFQLLPFRSPLLRESLLLSFPLATKMFQFARLSLACPWIQQQFERLTYSGISGSMLIFNSPKHFVACYALPRLWVPRYPP*

>peptide 9 (31 aa)
MSYFSAVAPGTRTLARGIFSTPSYPKVTLRP*

>peptide 10 (29 aa)
MDRSPRFGSISSDNCPMKTRFRYGSGGFP*

>peptide 11 (29 aa)
MLLGSEHKLVMLSATGLSPSRGAALHRFA*

>peptide 12 (89 aa)
DPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMSYFSAVAPGTRTLARGIFSTPSYPKVTLRP*

Sequence

>CNT30411768
CGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTAC
CTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGAGTTACTTCAGCGCCGTAGCGC
CTGGTACTCGGACATTGGCTCGAGGCATTTTCTCTACCCCTTCTTACCCTAAGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGC
CTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACACCTTTCGGCCTGATCTTAGGCCCTGACTCACCCT
CCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTC
CACACCTGCTCGCGCGGGTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCAT
CTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCT
TTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGA
CCCCATATTTTGGGGTCATATCTANNNNNNNNNNCGAGCTTTTCCTGGGAGTATGGCATGAGTTACTTCAGCGCCGTAGCGCCTGGTACTCGGACATTGG
CTCGAGGCATTTTCTCTACCCCTTCTTACCCTAAGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGA
CCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG
GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACACCTGCTCGCGCGGA
TGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCT
CGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGGTCAT
TTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCCATATTTTGGGGTCA
TATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCTAGTCGACTGCTGCGCCTCAA
CGCATTTCGGGGAGAACCACTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCC
ACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTCGCTACG
GCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCAGGCTCCTCCCACTGCATGGGA
GCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCT
TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCATAAGCTAGTGATGCTTTCGGCTACTGGACTCTCACC
ATCTAGGGGTGCAGCACTCCACCGCTTCGCCTAGCAGCACGACGCTTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCT
CGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTT
GCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTCGAAAGGTTGACCTATTCGGGA
ATCTCCGGATCTATGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTGCTACGCCCTTCCTCGTCTCTGGGTGCCTAGGTATCCACCGTAAGCCTTTC
CTCGTTTGAACCTCGCCGTTAACTTTAAGGCTATGCCATCCTAAGGTGCTGCTAAATGGAAGTATCTTATCAACGTCCATGAATGATAAACCATAGATCG
AACTGCCGAATCGGAAAAATTGGGTGCTATCATATACCTTTGTATCCGCTAAGTTCACGAGCTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACA
GGGTAAACCACCGCCTCTCAGGCCTCCCCGATCGATTCTACCATAGAGGCCAACGATAGACAATAACTCCCCCCCGAACACAGCTTACAACTTTCATCGT
ACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCTCAAAAGGTGCTGAGTTGGAATCCCATTCTAAGGATTCTTGCGGTTCCGGAGAATCCAGCTACAG
GAGAACCAGGAACGGAGAGCTTTCCCCCCCCT