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Detailed information on CNT30411763


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZI2|UXS2_ARATH, E-value = 2e-125

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316147Papaver somniferumCorylus avellana18.5428.0579.9209forward
CNT30700549Papaver somniferumQuercus lobata20.2357.7283.33228forward
CNT30499549Papaver somniferumCoffea canephora19.5244.980.45220forward
CNT30615836Papaver somniferumSesamum indicum17.9252.7481.68202forward
CNT3021247Papaver somniferumCitrullus lanatus27.9534.284.76315forward
CNT3068683Papaver somniferumQuercus suber19.4344.5181.28219forward
CNT30486152Papaver somniferumOlea europaea17.4821.7782.23197forward
CNT3098150Papaver somniferumSolanum tuberosum34.4379.1882.99388forward
CNT30511842Papaver somniferumSolanum lycopersicum34.3484.581.91387forward
CNT30145616Papaver somniferumMedicago truncatula34.6986.1283.38391forward
CNT30343308Papaver somniferumEragrostis tef11.3646.7284.38128forward
CNT30477892Papaver somniferumArabidopsis halleri19.8820.9383.93224forward
CNT30359610Papaver somniferumLactuca sativa39.0443.2280.45440forward
CNT30570592Papaver somniferumVitis vinifera20.2370.5978.51228forward
CNT30645151Papaver somniferumCannabis sativa30.3535.8980.12342forward
CNT3055709Papaver somniferumAmborella trichopoda30.0851.8379.94339forward
CNT30105598Papaver somniferumOryza longistaminata14.3723.5180.25162forward
CNT30332943Papaver somniferumCynara cardunculus39.6685.881.43447forward

Expression of CNT30411763

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MMMMYSLSFLFLSRFLSSEIFLYKVTITEGNAVQVV*

>peptide 2 (54 aa)
MIDLINFQQQWFNNIMSNHFKSRITKMMHNIFFPPCKEIINNDNTISPFHQSIN*

>peptide 3 (45 aa)
MVLGVLVNKYLIVLVIHVFCMLIPMPFLPKFLKKIWVLAYEIGNI*

>peptide 4 (32 aa)
MRMRKGLGQRLLWRWRFRVVQIRVFVPVACNE*

Sequence

>CNT30411763
CTAGATCTTGTCACTGATGGTTCCAGGCGCAAAACAGCGTACAAGGGGCAGATCCGAATGAAGAAATAATGCAAAACGTACCAATTGGATTGACATTTCC
CCAGTAAGTTTCAACTTGAGGATGTTGTAGAGGATCACCATAAACTTCACTGGTACTAGTCAACAAAAATCTAGCACCAACTCTTTTAGCTAACCCCAGC
ATATTCAGTGTTCCAACTACATTTGATATGATAGTCTTGACAGGATTGAATTTGTAATGAACAGGAGAAGCAGGACAAGCTAAATGATAGATCTGATCAA
CTTCCAACAACAATGGTTCAACAACATCATGTCTAATCATTTCAAATCTAGGATTACCAAAATGATGCATAACATTTTCTTTCCTCCCTGTAAAGAAATT
ATCAACAACGATAACACTATCTCCCCTTTCCATCAATCTATCAACTAGATGACTACCAACAAATCCAGCACCCCCAGTAACAACAATCCTCAACCCTTTC
CTTCTCAAACCTAACGGAATTTTCCCACCTGAATTTACAGATCTTTGCTCGTAAACAAATTTCTCCGATAGACGAGTTGAAGAATCAGAATTCGGAAAGT
ATTGTGCCGGAATCGAATCATAACTTCCTGTAAACTGTCTTGATGAGGATGAGGAAGGGATTAGGACAAAGATTACTGTGGCGATGGCGATTCCGAGTAG
TACAAATAAGAGTCTTTGTTCCCGTAGCATGTAACGAATAGCTCTGGTTACTGGTAAAAATGGTTTTGGGGGTTTTGGTAAATAAGTATCTGATTGTGCT
TGTGATTCATGTCTTCTGTATGTTAATTCCGATGCCATTTTTACCGAAATTTTTGAAGAAGATCTGGGTTTTGGCTTATGAGATCGGGAACATTTAGAAT
TGGATTTGAATTTGATATAAAAGGGGTTGCAAAAGCACTTTACGTTAATAAATAGGATAAAATCACTTTACGTGGAGATTTGAAGGTGATGATGATGATG
TACAGTTTGAGTTTTCTCTTCCTTTCTAGGTTTTTAAGCTCTGAGATTTTTCTTTATAAAGTTACGATTACGGAAGGAAATGCTGTTCAAGTTGTCTGAA
AAATATTCACATGAAATATGACTTAAC