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Detailed information on CNT3041150


BLAST search results

BLAST vs Swiss-Prot:
sp|P11481|TBA1_VOLCA, E-value = 7e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694759Chlamydomonas reinhardtiiOryza sativa57.6852.9279.47263forward
CNT30517675Chlamydomonas reinhardtiiJuglans regia43.8633.1179200forward
CNT30403515Chlamydomonas reinhardtiiBeta vulgaris43.276.6580.2197forward
CNT30708966Chlamydomonas reinhardtiiGlycine max33.1156.3482.78151forward
CNT30394677Chlamydomonas reinhardtiiTriticum turgidum41.0165.1686.63187forward
CNT30611949Chlamydomonas reinhardtiiArabis alpina28.7337.8680.92131forward
CNT30228Chlamydomonas reinhardtiiZea mays45.3927.6483.09207forward
CNT30655223Chlamydomonas reinhardtiiRosa chinensis11.6220.8792.4553forward
CNT30210906Chlamydomonas reinhardtiiHelianthus annuus44.377.3978.71202forward
CNT30684179Chlamydomonas reinhardtiiTriticum urartu36.426.4883.73166forward
CNT30721351Chlamydomonas reinhardtiiTriticum spelta36.425.0883.73166forward
CNT30620135Chlamydomonas reinhardtiiCajanus cajan46.4967.7383.96212forward
CNT30360524Chlamydomonas reinhardtiiLactuca sativa35.3125.1283.85161forward
CNT30704384Chlamydomonas reinhardtiiPrunus avium24.3419.9382.88111forward
CNT30106557Chlamydomonas reinhardtiiOryza longistaminata32.2468.6985.03147forward
CNT30331462Chlamydomonas reinhardtiiDioscorea rotundata23.4620.8286.92107forward
CNT30496537Chlamydomonas reinhardtiiDigitaria exilis12.9426.1188.1459forward
CNT3065151Chlamydomonas reinhardtiiSelaginella moellendorffii21.4947.5789.898forward

Expression of CNT3041150

Peptides detected in this lncRNA

>peptide 1 (50 aa)
YLPWRGSHLTIIEAGSKAALVISATDSCSWYAFSAEMMGAYELSMKWMRG*

>peptide 2 (88 aa)
VLAVAGVALDHHRGGLEGGVGDLGHRQLLVVRLLGRDDGRVRAEHEVDAGVGHQVVVGLDDGGRHLGRGVDGEAQLGLLAVVDRQALQ*

Sequence

>CNT3041150
GTACTTGCCGTGGCGGGGGTCGCACTTGACCATCATCGAGGCGGGCTCGAAGGCGGCGTTGGTGATCTCGGCCACCGACAGCTGCTCGTGGTACGCCTTC
TCGGCCGAGATGATGGGCGCGTACGAGCTGAGCATGAAGTGGATGCGGGGGTAGGGCACCAGGTTGTTGTAGGGCTCGACGACGGCGGTCGACACCTGGG
GCGAGGGGTAGACGGTGAAGCCCAGCTTGGACTTCTTGCCGTAGTCGACCGACAGGCGCTCCAGTAGCAGAGAGCCCAGGCCGGAACCGGTGCCACCGCC
GACGGCGTTGAAGACCAGGAAGCCCTGCAGACCGGTGCAGTTGTCGGCCAGCTTGCGGATGCGGTCCAGGGCCAGGTCGACAATCTCCTTGCCGATGGTG
TAGTGGCCGCGGGCGAAGTTGTTGGCGGCATCCTCCTTGCCGGAGATCAGCTGCTC