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Detailed information on CNT30411255


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Papaver somniferumOryza sativa33.8640.1694.651028reverse complement
CNT30225309Papaver somniferumHordeum vulgare29.8775.2790.41907reverse complement
CNT30400299Papaver somniferumTriticum turgidum33.8648.294.551028reverse complement
CNT30668159Papaver somniferumTriticum dicoccoides16.4770.0390.6500reverse complement
CNT30310298Papaver somniferumCamelina sativa33.5666.8297.061019forward
CNT30142438Papaver somniferumLolium perenne20.1998.0892.66613reverse complement
CNT30713553Papaver somniferumMalus domestica golden19.9389.7696.53605reverse complement
CNT30627950Papaver somniferumDaucus carota14.0699.394.85427reverse complement
CNT30364730Papaver somniferumSorghum bicolor12.9469.3194.4393forward
CNT30585638Papaver somniferumEchinochloa crusgalli20.4940.1894.21622forward
CNT30604668Papaver somniferumOryza punctata11.378.1393.88343reverse complement

Expression of CNT30411255

Peptides detected in this lncRNA

>peptide 1 (89 aa)
DPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMSYFSAVAPGTRTLARGIFSTPSYPKVTLRP*

>peptide 2 (75 aa)
MSRRLILQQAREPRLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFAIGHPGVFSLARWSLLIHTGFHVPHATRVRA*

>peptide 3 (54 aa)
MSSRLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSLGSDLHLVSPKLHPGHG*

>peptide 4 (53 aa)
MDSAAVRKVVSCLPMDSAAVRKVDLFGNLRIYAYFQLPEAFRRLLRPSSSLGA*

>peptide 5 (45 aa)
MLLGSEHKLVMLSATGLSPSRVQHSTASPSSTTLVLLSHNPVFTV*

>peptide 6 (69 aa)
MFQFARLSLACPWIQQQFERLSLACPWIQQQFERLTYSGISGSMLIFNSPKHFVACYALPRLWVPRYPP*

>peptide 7 (58 aa)
MINHRSNCRIGKIGCYHIPLYPLSSRAGDKRTRTADIRHRVNHRLSGLPDRFYHRGQR*

>peptide 8 (56 aa)
MFALLKPTFSLPLRPHLLARVLPSKAERSPTDAFLHPTASADRLAPFIFGARALDQ*

>peptide 9 (56 aa)
MFALLKPTFSLPLRPHLLARMLPSKAERSPTDAFLHPTASADRLAPFIFGARALDQ*

>peptide 10 (29 aa)
MDRSPRFGSISSDNCPMKTRFRYGSGGFP*

>peptide 11 (31 aa)
MSYFSAVAPGTRTLARGIFSTPSYPKVTLRP*

>peptide 12 (29 aa)
MSRRLILQQARGQSPGSSHCLGAYVTIAL*

>peptide 13 (35 aa)
MFYFTPRWGFFSPFPHGTTSLSVTQEYLALQGGPC*

Sequence

>CNT30411255
CGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTAC
CTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGAGTTACTTCAGCGCCGTAGCGC
CTGGTACTCGGACATTGGCTCGAGGCATTTTCTCTACCCCTTCTTACCCTAAGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGC
CTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACACCTTTCGGCCTGATCTTAGGCCCTGACTCACCCT
CCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTC
CACACCTGCTCGCGCGGGTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCAT
CTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCT
TTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGA
CCCCATATTTTGGGGTCATATCTANNNNNNNNNNCGAGCTTTTCCTGGGAGTATGGCATGAGTTACTTCAGCGCCGTAGCGCCTGGTACTCGGACATTGG
CTCGAGGCATTTTCTCTACCCCTTCTTACCCTAAGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGA
CCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG
GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACACCTGCTCGCGCGGA
TGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCT
CGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGGTCAT
TTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCCATATTTTGGGGTCA
TATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCTAGTCGACTGCTGCGCCTCAA
CGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCACTCGGTTCGGACCTC
CACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTCGCTAC
GGCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCAGGCTCCTCCCACTGCTTGGG
AGCTTACGTGACAATTGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCA
ACAGGCACGCGAGCCCAGGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGG
TACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAG
CATAAGCTAGTGATGCTTTCGGCTACTGGACTCTCACCATCTAGGGTGCAGCACTCCACCGCTTCGCCTAGCAGCACGACGCTTGTATTGCTCTCCCACA
ACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCG
CCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTCGAAAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTCGAAAGGTTGACCTATTC
GGGAATCTCCGGATCTATGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTGCTACGCCCTTCCTCGTCTCTGGGTGCCTAGGTATCCACCGTAAGCC
TTTCCTCGTTTGAACCTCGCCGTTAACTTTAAGGCTATGCCATCCTAAGGTGCTGCTAAATGGAAGTATCTTATCAACGTCCATGAATGATAAACCATAG
ATCGAACTGCCGAATCGGAAAAATTGGGTGCTATCATATACCTTTGTATCCGCTAAGTTCACGAGCTGGAGATAAGCGGACTCGAACCGCTGACATCCGC
CACAGGGTAAACCACCGCCTCTCAGGCCTCCCCGATCGATTCTACCATAGAGGCCAACGATAGACAATAACTCCCCCCCGAACACAGCTTACAACTTTCA
TCGTACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCTCAAAAGGTGCTGAGTTGGAATCCCATTCTAAGGATTCTTGCGGTTCCGGAGAATCCAGCT
ACAGGAGAACCAGGAACGGAGAGCTTTCCCCCCCCT