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Detailed information on CNT30410857


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1EC66|UBQ3_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-119

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044330Papaver somniferumPrunus dulcis69.4574.1684.9907forward
CNT30169898Papaver somniferumPistacia vera69.8351.7982.79912forward
CNT30538027Papaver somniferumBrassica napus69.347.7383.2905forward
CNT30311191Papaver somniferumCamelina sativa68.8480.1282.87899forward
CNT3077383Papaver somniferumBrassica juncea68.4568.9883.11894forward
CNT30262720Papaver somniferumBrassica rapa69.9873.4183.15914forward
CNT30214147Papaver somniferumHelianthus annuus52.7685.783.02689forward
CNT30623426Papaver somniferumDaucus carota70.2150.8984.51917forward
CNT30480747Papaver somniferumArabidopsis halleri70.1478.9782.97916forward
CNT30355893Papaver somniferumLactuca sativa69.8355.0181.47912forward
CNT30704857Papaver somniferumPrunus avium69.8357.7684.87912forward
CNT30114615Papaver somniferumEutrema salsugineum69.692.6683.06909forward

Expression of CNT30410857

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVMVLPVKVLTKICIPPLRRRTRWRVDSFWML*

>peptide 2 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPLRRSTKWRVDSFWML*

>peptide 3 (48 aa)
MESRLLLDVVVSKGATIFQLLSGKDQPLLIWRNTLLILDLSLNIVDGV*

>peptide 4 (79 aa)
MESRLLLDVVVGKSATIFQLLSGKDQTLLVWRDSFLILNLSLDIIDGVRALDFQSDGLTGQGFDKDLHTTSKTEDKMES*

>peptide 5 (30 aa)
MVFPVKVLTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30410857
TACAAGTTTAACTTGATCAAGTGCGAACTCAAAACAGTTCTGCAAACATAGAAATACGGAGTAACACAAGTTTAGGATACACCCCTGCTAACTTGACCAA
TTAGAGAATACCATAAGCTCAAAACCAGTTTACTAAAGCAACAATTTATTCAATAACCAACAAGAACCACATACGATGATAACACTGCACCCAACTGTTA
ATGCAGTGAATAGAACATAAGGGAAATCCTAAAAGAGTAAACGAAAACATAACATAAAGTTCCTCCAACTAAGGGAACACAAACGACACCAAATCATCAA
GCCATAGCTGAAACACCATCAACAGACACTCTAGTTACCACCACGAAGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGA
GTACGACCATCCTCCAATTGCTTTCCTGCGAAAATCAAACGTTGCTGGTCTGGAGGGATCCCTTCCTTATCTTGGATCTTGGCCTTAACATTGTCAATAG
TGTCCGAGCTCTCCACCTCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAGATCTGCATACCACCACGTAGACGAAGCACCAAATGGAGAGTAGA
CTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGAATACCCTCCTTATCT
TGGATCTTAGCCTTAACATTGTCGATGGTGTCTGAGCTCTCCACCTCAAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAAATCTGCATACCACCTC
TGAGACGAAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGTTG
CTGGTCTGGAGGGATTCCTTCCTTATCTTGAATCTTAGCCTTGACATTATCGATGGTGTCAGAGCTCTCGACTTCCAAAGTGATGGTCTTACCGGTCAAG
GTTTTGACAAAGATTTGCATACCACCTCTAAGACGGAGGACAAGATGGAGAGTTGATTCCTTCTGGATGTTATAGTCAGCTAGAGTTCTTCCATCTTCCA
ACTGCTTACCAGCGAAGATCAAACGTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTCTCGAC
CTCAAGGGTGATGGTCTTACCAGTAAGAGTTTTCACAAAGATCTGCATCTGTTAATCAAACAAAACACAACAACATCAGACTAACCGATCAAGAGAATCA
TAAAAC