Detailed information on CNT30410854


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30503447Papaver somniferumNicotiana attenuata55.5367.4898.051129reverse complement
CNT30511396Papaver somniferumSolanum lycopersicum29.7166.0194.21604forward

Expression of CNT30410854

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MLRGVENKHISGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP*

>peptide 2 (33 aa)
MNGAKRSAEAVGCKNASVGVQRQPGGLPRSSHP*

>peptide 3 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 4 (60 aa)
MVIGSRTQGDLRVRRGRENASSQCPSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTGG*

>peptide 5 (53 aa)
MGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 6 (68 aa)
MNGAKRSAEAVGCKNASVGERSALEGSTRASRCGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGG*

>peptide 7 (64 aa)
PFSSTLGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGTQRRGRA*

>peptide 8 (77 aa)
MPLEPRASWFSPKCVEAQQSTRHLGVKHCFGAGRESGTKSRQTLNTRYDPKIWGQGRPVRRWGISFIVERETARITS*

Sequence

>CNT30410854
TCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAACGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGG
AAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAGGCACCCAGAGACGAGGAAGGGCGTAGCAAG
CGACGAAATGCTTCGGGGAGTTGAAAATAAGCATATATCCGGAGATTCCCGAATAGGTCAACCTTTCGAACTGCTGCTGAATCCATGGGCAGGCAAGAGA
CAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAA
AACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGATGCTGCACCCTAGATGGTGAGAGTCCAGTAGCCGAAAGCATCACTA
GCTTATGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGA
AGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGATGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCTGGGCTCTGAC
CGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATTG
TCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGAGTGATGTTGAAGAATCA
GCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTCGACTAGACATCTAGG
GGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCCAAAATATGGGGTCAAGGTCGGCCA
GTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGT
GCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGGGCTA
AGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTA
ATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCG
CCTTAGAGGGAAGCACCCGCGCGAGCAGGTGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAA
ACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGTGTAGTCGATGGACAACAGGTGAATATTCCTGT
ACTACCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGACCTTAGGGTAAGAAGGGGTAG
AGAAAATGCCTCGAGCCAATGTCCGAGTACCAGGCGCTACGGCGCTGAAGTAACTCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGG
GTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTC
GGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCG