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Detailed information on CNT30410573


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 7e-117

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515273Papaver somniferumJuglans regia36.2650.8682.52326forward
CNT30376473Papaver somniferumArabidopsis thaliana45.4958.2680.44409forward
CNT30380094Papaver somniferumManihot esculenta38.3831.9483.77345forward
CNT30630888Papaver somniferumVigna unguiculata24.5832.6485.07221forward
CNT30710333Papaver somniferumGlycine max38.3839.6682.32345forward
CNT3094391Papaver somniferumSolanum tuberosum25.4752.484.28229forward
CNT30145793Papaver somniferumMedicago truncatula45.6167.6684.39410forward
CNT3061459Papaver somniferumArabidopsis lyrata40.0461.4381.39360forward
CNT30611231Papaver somniferumArabis alpina19.1329.9182.56172forward
CNT30651207Papaver somniferumRosa chinensis26.0334.5685.47234forward
CNT30619829Papaver somniferumCajanus cajan45.9441.8981.11413forward
CNT30570681Papaver somniferumVitis vinifera28.4818.7380.47256forward
CNT30174623Papaver somniferumVigna angularis21.9123.1284.77197forward
CNT30113105Papaver somniferumFicus carica21.824.582.65196forward
CNT30725909Papaver somniferumLupinus angustifolius26.8142.8884.23241forward

Expression of CNT30410573

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MERCGAAKLNGLGLANDTVEDCFHAKLLDFEVERVGVKRAA*

>peptide 2 (30 aa)
TLRHPVAIILFWGHPRVAQTSTPRCENHFS*

>peptide 3 (29 aa)
MKILNFTIRENPVKLVLDLVLGSQSSSKS*

Sequence

>CNT30410573
ACCCTAAGACACCCCGTAGCCATTATCTTGTTTTGGGGACATCCTAGAGTAGCGCAAACCAGCACCCCAAGGTGCGAAAACCATTTTTCTTGATGAAAGT
TGGCTAAATACTTAGAGTTAAGACTAAGAAGACTATCCATTTGAATTGAAATTATACAGTAATCCACATGTTTAATGGTAGCTTTGGAACATGAAAATAC
AAATTAAGTTCAAACAATAATTTCATTACATAATCACACAAAACACATAAAAAGTTATCTCATCACAAATCATAAGCTTGTTTTCCAGTGAACTTAACTT
CAATAGGGCTGACATTCTTTCCGATAGACCTGAAGTTTTGTCCGACTCCTTGACGTCCTGGGTTCACCTTCTCTGGGTACACACCATCTTTAGGATGAAG
ATATTGAACTTCACCATTAGGGAAAACCCTGTAAAATTGGTACTTGATCTTGTACTTGGATCTCAATCTAGTTCCAAGAGCTAAACACTGTTCTTTCCTA
GCCAACTTGAGCAAGTTAGGTCCTTGTCTCATGATAGCTGCACCTCCAGTTGGCATTTCAAATACTTGTTCTTTAGGAGAATCCCAAGTGATCACGTAGA
ACTCCTCTACTTGAGCTTTACGCAACAATCCACCAGTACTACCTCCGAAGATTGGAGATGGTGTGTTTGGGTCCAATTCTGGTGGAGTGAAACCTGCTGG
GGCCTTAATGGAACGTTGTGGTGCAGCGAAGTTGAATGGTTTAGGGCTAGCGAATGACACAGTTGAGGATTGTTTCCATGCTAAATTGCTTGATTTTGAG
GTGGAAAGAGTTGGGGTAAAAAGAGCTGCCTGAGTTGCCATAGCCATGGAATATTCAAGAGGTAGTTGATTTCCTCGAGCTGCAGTAGGTTGTGGTAAG