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Detailed information on CNT30410483


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 5e-57

BLAST vs NONCODE:
NONCQUT001646, E-value = 3e-100

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549212Papaver somniferumIpomoea triloba47.8532.4597.96979forward
CNT30270599Papaver somniferumChenopodium quinoa58.8573.9696.261204forward
CNT30730518Papaver somniferumCorchorus capsularis46.7797.0697.39957forward
CNT30406993Papaver somniferumBeta vulgaris4.5924.2995.7494reverse complement
CNT30632746Papaver somniferumCapsicum annuum9.7827.6696.5200reverse complement
CNT30396824Papaver somniferumTriticum turgidum37.4476.0792.56766reverse complement
CNT30569398Papaver somniferumActinidia chinensis70.0973.3994.351434forward
CNT30511593Papaver somniferumSolanum lycopersicum20.1463.2988.35412forward
CNT30552690Papaver somniferumOryza glaberrima53.4771.4693.331094forward
CNT30442196Papaver somniferumAegilops tauschii41.79100.8393.8855reverse complement
CNT30646904Papaver somniferumRosa chinensis8.2160.4391.67168forward
CNT30205642Papaver somniferumHelianthus annuus47.0793.0498.13963forward
CNT30688674Papaver somniferumTriticum urartu41.0663.7893.69840forward
CNT30642274Papaver somniferumCannabis sativa39.6499.2793.34811reverse complement
CNT30150154Papaver somniferumBrachypodium distachyon43.9478.5892.66899forward
CNT30104374Papaver somniferumOryza rufipogon50.0577.1192.971024reverse complement
CNT30576813Papaver somniferumOryza barthii9.6326.7396.45197forward
CNT30581628Papaver somniferumEchinochloa crusgalli9.6857.8999.49198forward
CNT30497700Papaver somniferumDigitaria exilis12.2745.8989.24251reverse complement
CNT30115272Papaver somniferumEutrema salsugineum24.49103.0988.42501forward

Expression of CNT30410483

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MTRSIRSGTRHLFSLFNSLTTRKNHCSTL*

>peptide 2 (30 aa)
MKKNEKVVFFKTPIITSLLSHFTPRKAPFF*

>peptide 3 (49 aa)
MKRSFSSKPQLLHPFSPTSHLGRHPSSRDKRAFHIFLTRNEMAEERFLF*

>peptide 4 (36 aa)
MKNQKLCPPSLSRDGRAEAFGVPSSQELGPHNHQPI*

>peptide 5 (78 aa)
MEGQRPLVSPPVKNWGLTITSQYNKYAFISCLYSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEVLRKNSSTPG*

>peptide 6 (71 aa)
MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSYRAHGKHWVAKCGADNC*

>peptide 7 (56 aa)
MSVKMRTTCTWTERPYEALLFPGIGFGLFLRSLGGRRRRPPSGGARAISEIPLWKS*

Sequence

>CNT30410483
AAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGAAGC
CGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAAC
GATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTACT
GTTCCCTGGGATTGGCTTTGGGCTTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCTCCTTCCGGGGGGGCCCGAGCCATCAGTGAGATACCACTC
TGGAAGAGCTAGAATTCTAACCTTGTGCCAGGACCCACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACG
GAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGA
AAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTCCCCAAGAGTTCA
CATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTG
AGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGAC
GCACCTCTGGTGTACCAGTTATCGTGCCCACGGTAAACACTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCA
AGATGAGTGCTCTCCTATTCCGACTTCCCCAAAGCCTCCGGTAGCACAGCCGAGACAGCGACGGGTTCTCTGCCCCTGCGGGGATGGAGCGACAGAAGTT
TTGAGAATCCAAGAGAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTAACA
GACCGATAGACTTGAACCTTGTTCCTACATGACCCGATCAATTCGATCAGGCACTCGCCATCTATTTTCATTGTTCAACTCTTTGACAACACGAAAAAAC
CATTGTTCAACTCTTTGACAACATGAAAAACCAAAAGCTCTGCCCTCCCTCTCTATCAAGGGATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAA
GAATTGGGGCCTCACAATCACCAGCCAATATAATAAATATGCTTTTATCTCATGCCTTTATTCGTTCATGGTTCGATATTCTGGTGTCCTAGGCGTAGAG
GAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCGGAAAAATAGCTCGACGCCAGGATGAT
AAAAAGCTTAACACCTCTCATTCTTATTACTTATTCAATATGAAAAAAAATGAAAAGGTCGTTTTCTTCAAAACCCCAATTATTACATCCCTTCTCTCCC
ACTTCACACCTCGGAAGGCACCCTTCTTCTAGAGATAAACGCGCTTTCCACATCTTCTTAACCCGAAATGAAATGGCTGAGGAAAGGTTCCTTTTTTAGG
GTACTCCCGAGAACAGATCCTGTGGAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAATCCCT
CCTCGCCCACAACTGGCCCAAAAGGGAAGGACCTTTCCTTTACCTCTGGGGGTAGGAAAATACTGATCGGGATAGTGGACCCAAAGTTATGTAACTTGGG
TGTGAGTCTTTTGTCGAAACGGAATGGTCTTACTTTTTATTTTTTT