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Detailed information on CNT30410430


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639555Papaver somniferumNymphaea colorata47.2980.09971368reverse complement
CNT30500477Papaver somniferumCoffea canephora51.5481.8896.511491reverse complement
CNT30196858Papaver somniferumPisum sativum47.774.3194.641380reverse complement
CNT30503308Papaver somniferumNicotiana attenuata44.899.9297.611296forward
CNT3090649Papaver somniferumSolanum tuberosum51.554.596.981490reverse complement
CNT30291213Papaver somniferumTriticum aestivum50.2941.8894.091455reverse complement
CNT30460907Papaver somniferumSaccharum spontaneum50.8544.1594.151471reverse complement
CNT3018333Papaver somniferumZea mays49.7450.494.231439reverse complement
CNT30655263Papaver somniferumRosa chinensis51.3382.2793.471485reverse complement
CNT30206293Papaver somniferumHelianthus annuus47.7462.8697.971381reverse complement
CNT30688464Papaver somniferumTriticum urartu51.4380.8794.151488reverse complement
CNT30596725Papaver somniferumOryza meridionalis50.8842.6594.091472reverse complement
CNT30154922Papaver somniferumPrunus persica51.4788.1693.691489forward
CNT30103033Papaver somniferumOryza rufipogon50.9995.192.751475forward

Expression of CNT30410430

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSYFSAVAPGTRTLARGIFSTPSYPKVTLRP*

>peptide 2 (29 aa)
MDRSPRFGSISSDNCPMKTRFRYGSGGFP*

>peptide 3 (53 aa)
MDSAAVRKVVSCLPMDSAAVRKVDLFGNLRIYAYFQLPEAFRRLLRPSSSLGA*

>peptide 4 (45 aa)
MLLGSEHKLVMLSATGLSPSRVQHSTASPSSTTLVLLSHNPVFTV*

>peptide 5 (43 aa)
MSSRLLRLNAFRGEPLALGSSGISPLTTTHPLILQHQSVRTST*

>peptide 6 (35 aa)
MFYFTPRWGFFSPFPHGTTSLSVTQEYLALQGGPC*

>peptide 7 (69 aa)
MFQFARLSLACPWIQQQFERLSLACPWIQQQFERLTYSGISGSMLIFNSPKHFVACYALPRLWVPRYPP*

>peptide 8 (58 aa)
MINHRSNCRIGKIGCYHIPLYPLSSRAGDKRTRTADIRHRVNHRLSGLPDRFYHRGQR*

>peptide 9 (56 aa)
MFALLKPTFSLPLRPHLLARVLPSKAERSPTDAFLHPTASADRLAPFIFGARALDQ*

>peptide 10 (56 aa)
MFALLKPTFSLPLRPHLLARMLPSKAERSPTDAFLHPTASADRLAPFIFGARALDQ*

>peptide 11 (75 aa)
MSRRLILQQAREPRLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFAIGHPGVFSLARWSLLIHTGFHVPHATRVRA*

>peptide 12 (89 aa)
DPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMSYFSAVAPGTRTLARGIFSTPSYPKVTLRP*

Sequence

>CNT30410430
CGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTAC
CTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGAGTTACTTCAGCGCCGTAGCGC
CTGGTACTCGGACATTGGCTCGAGGCATTTTCTCTACCCCTTCTTACCCTAAGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGC
CTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACACCTTTCGGCCTGATCTTAGGCCCTGACTCACCCT
CCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTC
CACACCTGCTCGCGCGGGTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCAT
CTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCT
TTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGA
CCCCATATTTTGGGGTCATATCTANNNNNNNNNNCGAGCTTTTCCTGGGAGTATGGCATGAGTTACTTCAGCGCCGTAGCGCCTGGTACTCGGACATTGG
CTCGAGGCATTTTCTCTACCCCTTCTTACCCTAAGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGA
CCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG
GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACACCTGCTCGCGCGGA
TGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCT
CGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGGTCAT
TTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCCATATTTTGGGGTCA
TATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCTAGTCGACTGCTGCGCCTCAA
CGCATTTCGGGGAGAACCACTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCC
ACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTCGCTACG
GCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGAGCCCAGGCTCCTCCCACTGCTTGGGAGCTTA
CGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAA
GGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCATAAGCTAGTGATGCTTTCGGCTACTGGACTCTCACCATCTA
GGGTGCAGCACTCCACCGCTTCGCCTAGCAGCACGACGCTTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGC
TACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTCGA
AAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTCGAAAGGTTGACCTATTCGGGAATCTCCGGATCTATGCTTATTTTCAACTCCCCGAAGCAT
TTCGTCGCTTGCTACGCCCTTCCTCGTCTCTGGGTGCCTAGGTATCCACCGTAAGCCTTTCCTCGTTTGAACCTCGCCGTTAACTTTAAGGCTATGCCAT
CCTAAGGTGCTGCTAAATGGAAGTATCTTATCAACGTCCATGAATGATAAACCATAGATCGAACTGCCGAATCGGAAAAATTGGGTGCTATCATATACCT
TTGTATCCGCTAAGTTCACGAGCTGGAGATAAGCGGACTCGAACCGCTGACATCCGCCACAGGGTAAACCACCGCCTCTCAGGCCTCCCCGATCGATTCT
ACCATAGAGGCCAACGATAGACAATAACTCCCCCCCGAACACAGCTTACAACTTTCATCGTACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCTCAA
AAGGTGCTGAGTTGGAATCCCATTCTAAGGATTCTTGCGGTTCCGGAGAATCCAGCTACAGGAGAACCAGGAACGGAGAGCTTTCCCCCCCCT