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Detailed information on CNT30409978


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 4e-127

BLAST vs NONCODE:
NONSTUT001352, E-value = 7e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513343Papaver somniferumJuglans regia21.734.3985.99207forward
CNT30269327Papaver somniferumChenopodium quinoa40.2543.8982.03384forward
CNT30380511Papaver somniferumManihot esculenta27.2536.9383.46260forward
CNT3099363Papaver somniferumSolanum tuberosum60.955.681.41581forward
CNT30539776Papaver somniferumBrassica napus31.4560.2482.67300forward
CNT30171121Papaver somniferumTrifolium pratense26.9429.2785.21257forward
CNT30146402Papaver somniferumMedicago truncatula66.2562.6481.01632forward
CNT30609983Papaver somniferumGossypium raimondii40.3647.8382.6385forward
CNT30217700Papaver somniferumKalanchoe fedtschenkoi40.7849.381.49389forward
CNT30359036Papaver somniferumLactuca sativa61.3254.8882.91585forward
CNT30336168Papaver somniferumCynara cardunculus69.2965.1980.79661forward
CNT30725273Papaver somniferumLupinus angustifolius60.856.3180.52580forward

Expression of CNT30409978

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MENIANLPFLISFTFNSAKASGSSAKPNGSKLPPG*

>peptide 2 (39 aa)
MYITNARQTILQNANSKTTRSFHLIVDYSDHFPGAKFVA*

>peptide 3 (60 aa)
MQIEFHTHKENVHYKRTSNNSSKCKFKDNTFISSDCRLLRSFSRGEVCSVVPGIVGDGVS*

>peptide 4 (43 aa)
PLFLGDCLDCFTIFSTTLLNLSRVLLNTEKKKIIKDANRISYT*

Sequence

>CNT30409978
GCCGTTGTTCTTGGGTGATTGTTTGGACTGTTTCACCATATTCTCAACCACATTACTTAACTTGAGTAGAGTATTATTGAACACAGAGAAAAAAAAAATA
ATCAAAGATGCAAATAGAATTTCATACACATAAAGAAAATGTACATTACAAACGCACGTCAAACAATTCTTCAAAATGCAAATTCAAAGACAACACGTTC
ATTTCATCTGATTGTCGATTACTCAGATCATTTTCCAGGGGCGAAGTTTGTAGCGTAGTTCCAGGCATTGTTGGCGACGGGGTCAGCTAAGTGGTCAGCC
AAATTTTCCAAAGGACCCTTGCCTGTCACGATTGCTTGAACAAAGAATCCAAACATGGAGAACATAGCCAATCTCCCGTTCTTAATCTCCTTCACCTTCA
ATTCAGCAAAAGCTTCAGGGTCATCAGCTAAGCCTAATGGGTCGAAGCTTCCACCAGGGTAAAGTGGGTCCTCCTGCAACTCTGTAACCTTCAACTGCTC
CCATCAAGATAACTTGTGTTGCCCAAATGGCAAGGATGCTCTGAGCATGAACCAAGCTTGAGTTACCCAAGTAGTCCAATCCACCTTCACTGAAAATTTG
TGAACCGGCCTTGAACCAAACGGCTTCACCAAATTTAACACCATTGCGAGACAACAACTCGGGGAAGACACATCCAAGAGCTCCCAACATAGCCCATCTG
CAGTGGATGACCTCGAGCTCACGGTTCTTGGCGAAGGTTTCTGGATCAGCAGAAAGCCCGGCGGTGTCCCAACCGTAATCACCGGCAAATTCACCGGTTA
AGTACGATGGAGATTCACCAGAGAATGGTCCCAAGTACTTAACACGGTCAGGTCCGTACCATGGGCTAGATGAAACAGTTTTTGGCTTTGCAACGGTTTT
TCTCATGGAAATTCTTCCTTCACCGAAAACTTCAGAGCTTGAAGGAACAAGTGC