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Detailed information on CNT30409088


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372997Papaver somniferumArabidopsis thaliana21.419.6691.4370reverse complement
CNT30618136Papaver somniferumSesamum indicum23.2413.3693.4276forward
CNT30526805Papaver somniferumPhaseolus vulgaris21.4123.19070reverse complement
CNT30587665Papaver somniferumMusa acuminata24.1625.4889.8779reverse complement
CNT30538764Papaver somniferumBrassica napus20.4922.1192.5467reverse complement
CNT30238127Papaver somniferumBrassica oleracea20.4921.9792.5467reverse complement
CNT30313675Papaver somniferumCamelina sativa21.4123.6588.5770forward
CNT3059454Papaver somniferumArabidopsis lyrata21.4123.191.4370reverse complement
CNT3081558Papaver somniferumBrassica juncea20.498.3689.5567forward
CNT30260145Papaver somniferumBrassica rapa20.4922.1991.0467reverse complement
CNT30647270Papaver somniferumRosa chinensis23.2424.7688.1676reverse complement
CNT30719063Papaver somniferumMalus domestica golden24.1610.3391.1479reverse complement
CNT30623435Papaver somniferumDaucus carota23.5527.685.7177forward
CNT30477933Papaver somniferumArabidopsis halleri21.4123.191.4370reverse complement
CNT30619930Papaver somniferumCajanus cajan20.1810.9889.3966reverse complement
CNT30706625Papaver somniferumPrunus avium23.243.9790.7976reverse complement
CNT30120361Papaver somniferumCitrus clementina20.1821.7889.3966forward
CNT30726065Papaver somniferumLupinus angustifolius18.9620.1391.9462reverse complement

Expression of CNT30409088

Peptides detected in this lncRNA

>peptide 1 (43 aa)
GHSCGYKKVQKNKKVVVQLTRLTRLSWNWGTSTRDPSTVESGR*

Sequence

>CNT30409088
GGCCACTCTTGCGGCTATAAAAAAGTACAAAAAAACAAAAAGGTGGTTGTTCAACTGACTCGGCTCACCAGGCTGAGTTGGAACTGGGGCACATCGACTC
GTGATCCTTCCACTGTCGAGAGCGGGAGGTGATCGTTGCTCTGTGAAACCAGCCTGACGCAGTGCCCTCCGCTATAGTGGTCACACAGCCCAAGCCTACG
CAAGGACAATGAGACTAACTCCCAACTTGGAGCGGGCGAGTTAACACAGCCTACGCACCAGCACCTACCGGGTGAAACCCGACCAGTGTTCAACTATCTT
AATATCCCCACTCGGGTTACAAGCTCG