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Detailed information on CNT30408909


BLAST search results

BLAST vs Swiss-Prot:
sp|P12062|CB26_PETSP, E-value = 8e-94

BLAST vs NONCODE:
NONSTUT002514, E-value = 5e-40

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30711475Papaver somniferumGlycine max74.7823.3981.52341forward

Expression of CNT30408909

Peptides detected in this lncRNA

>peptide 1 (30 aa)
GLLVIELSEKETHLQDRRCGHKGFQLDPFR*

>peptide 2 (43 aa)
MTLGHQLILEGQKIHRGKVCLVLLQVDHHQLCIPPQTPLAQPE*

Sequence

>CNT30408909
AAGGACTATTGGTGATCGAGCTTAGTGAGAAAGAAACCCATTTACAGGATCGGCGATGTGGTCATAAAGGTTTTCAATTGGACCCTTTCCGGTAACAATA
GCCTGAACGAAATACCCAAACATAGAGAACATAGCAAGTCTTCCATTCTTGATTTCCTTTACCTTCAATTCAGAGAATGACTCTGGGTCATCAGCTAATC
CTAGAGGGTCAAAAGATCCACCGGGGTAAAGTTTGTCTAGTCCTTCTCCAAGTGGACCACCACCAACTCTGTATCCCTCCACAAACCCCATTAGCACAAC
CTGAGTAGCCCAGATTGCAAGAATGCTTTGGGCATGTACCAAGTTGGGGTTTCCAAGGTAGTCCAAACCTCCCTCGGAGAAGATCTGTGATCCAGCTTTG
AACCATACTGCCTCGCCGAAGTTGATACCGTTCTTTGAGAGAACCTCAGGGAAGAC