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Detailed information on CNT30408726


BLAST search results

BLAST vs Swiss-Prot:
sp|Q08185|RBS5_MESCR, E-value = 1e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727206Papaver somniferumCorchorus capsularis27.277.8182.22180forward

Expression of CNT30408726

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MILMKEPGYAALASSSSLITWEASVQPNMGSFHIVQ*

>peptide 2 (43 aa)
MGEGMRGSQTSSNQLVAIPVYESSGVEFQTGNPSITEKVVDFL*

Sequence

>CNT30408726
TCATACATACACTCGAATCCATTTAAAGATACGAATAATATAATACGCTAAAACCGAATTAGGGAAGAAATTAAAACAAAACAAAAAATAAAAAGACACA
GATTAAAGTGTGCGTGGCTTCATCTTTTACTGTTCGTAGCTGGTACTCTCGGGCTTGTATGCGATGAAACTAACACATTGTACTTGACGAACGTTGTCGA
ATCCGATGATTCTGATGAAAGAGCCTGGGTATGCAGCCTTGGCCTCTTCTAGCTCCTTGATAACCTGGGAAGCGTCGGTACAACCGAACATGGGTAGCTT
CCACATTGTCCAGTAACGACCATCGTAGTATCCAGGGGTGTTACCGTGTTCTCTGTAGACGAATCCTCTGGCGTCGAATTCCAAACAGGGAACCCATCCA
TTACGGAGAAGGTAGTCAACTTCCTTTGATAGTTGTTCGACGGTCAATGGGGGAAGGTATGAGAGGGTCTCAAACTTCTTCAAACCAGTTGGTGGCCATA
CCTGTTTACGAATCCTCTGGCGTCGAATTCCAAACAGGGAACCCATCCATTACGGAGAAGGTAGTCGACTTCCTTTGATAGTTGCTCGACAGTCAATGGG
GGAAGGTATGAGAGGGTCTCAAACTTCTTCAAACCAGTTGGTGGCCACACCTGTTTGTGC