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Detailed information on CNT30408512


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30205015Papaver somniferumHelianthus annuus11.5723.984.6998forward

Expression of CNT30408512

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MFMEFLSEDLFFEAKLRKTNRGLPNGENSLRMVEITVLLDKTGLQGTQSFYQEL*

>peptide 2 (41 aa)
MEDVQRVLHKCFSPLFKVQVKCSTTVEKIFSFIAKRLNKSC*

>peptide 3 (30 aa)
SEYFLLERLNRVICNRTSSSFLLLLNLRVI*

Sequence

>CNT30408512
CTTCTGAATACTTTCTGCTCGAACGTCTTAATCGAGTCATATGCAATCGAACTTCTTCTTCGTTTTTGCTACTTCTTAATTTGAGAGTCATATGAAACTC
TCAAATCTCTTCGTTCTCTATCTGTTTTTTCACGCTAAAAAACAACTAATTTTCCAGGAGATCCAAGACCTGTAAAAGCATCAAAATTATCTAGGAGATT
GAAGAACATAGTAGCGGTTGATGTAAACTTCGATAATTTTTTCAACCCTGACTCCTGAAATACAGGTTTGCGGTTTTGATTCAGGGTTATTGTTATTCAA
ATCAAACATGTTCATGGAATTTTTAAGTGAAGATCTCTTTTTTGAAGCCAAATTAAGGAAAACCAATCGGGGTTTACCCAATGGTGAAAATTCTCTAAGG
ATGGTAGAAATTACGGTTTTGCTTGATAAAACAGGGCTTCAGGGTACTCAAAGTTTCTACCAAGAATTATAAAAGCAAAAGTGTTATATCGATTTGTATG
TAGGGATTTCTATCGGTTAATATCATCGTAATTACACCTGCCGGTACCGGGAGAGATAATAAAAGGAGGAAGGCTTTCACTAGAACGGACCATACAAAGA
GGGGATGGAAGACGTGCAGAGGGTGTTACATAAATGTTTTTCGCCTCTTTTTAAAGTCCAGGTTAAATGTTCAACAACAGTTGAGAAAATCTTCTCATTC
ATAGCAAAAAGACTAAACAAAAGTTGCTAATTGATTTGTTTTTCGTTCGTTATATGCACCGGTGATATACTGTTTCCCATTCATCTATATAGAGTTCTCC
ATCTCTGCATCAGTAATATACTCCTCTTTTTTATTATGTAACCCGCA