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Detailed information on CNT30407229


BLAST search results

BLAST vs Swiss-Prot:
sp|P13348|PETD_AUXPR, E-value = 1e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632102Beta vulgarisVigna unguiculata101.4652.4287.9347forward
CNT30201894Beta vulgarisPisum sativum101.7519.5487.64348forward
CNT30504292Beta vulgarisNicotiana attenuata101.4619.4588.47347forward
CNT3090242Beta vulgarisSolanum tuberosum102.3429.9485.71350forward
CNT30193370Beta vulgarisSecale cereale101.4621.4984.44347forward
CNT30286546Beta vulgarisTriticum aestivum79.5318.3485.66272forward
CNT3085551Beta vulgarisVigna radiata33.0449.5689.38113forward
CNT30556068Beta vulgarisOryza glaberrima80.4137.4785.82275forward
CNT30145111Beta vulgarisMedicago truncatula30.723.4990.48105forward
CNT30435040Beta vulgarisAegilops tauschii101.4638.685.01347forward
CNT30662532Beta vulgarisTriticum dicoccoides83.6341.5184.62286forward
CNT30309624Beta vulgarisCamelina sativa88.671.886.8303forward
CNT30131654Beta vulgarisLolium perenne57.8967.3582.32198forward
CNT30230699Beta vulgarisAnanas comosus61.1135.7987.56209forward
CNT30655369Beta vulgarisRosa chinensis80.999.5989.89277forward
CNT30215737Beta vulgarisHelianthus annuus36.8441.3187.3126forward
CNT30622073Beta vulgarisCajanus cajan83.0470.8288.03284forward
CNT30419844Beta vulgarisPapaver somniferum101.4658.1286.17347forward
CNT3025179Beta vulgarisPopulus trichocarpa62.8726.8886.98215forward
CNT30104480Beta vulgarisOryza rufipogon52.0535.1185.96178forward
CNT30557534Beta vulgarisPanicum hallii31.8717.9688.07109forward

Expression of CNT30407229

Peptides detected in this lncRNA

>peptide 1 (54 aa)
GNVAPIPNQRATTVPTKKTVIATRRRNGFWNLLTFSKKGTVNNPAGTEIIKRTP*

Sequence

>CNT30407229
GGTAATGTTGCTCCAATACCTAACCAAAGGGCCACTACCGTACCAACCAAAAAGACAGTTATAGCTACTAGACGACGAAATGGATTTTGGAATTTATTAA
CATTCTCTAAAAAAGGAACTGTTAATAATCCCGCAGGGACTGAAATCATTAAAAGAACGCCATAATATTTTATTTGGTACCGTACGAAGTATTTGAAATA
CAGGAAAAAAATACCATTCAGGTAATATTTCCAGAGTTACAAACGGATCCGCCGGCTCACCAATCATTGATGGTTCTAACCGCTAAGCCTACGTTACACG
CAATAGTACCTAAAATTACTACAGGAAAAATATATAAAAGAT