Detailed information on CNT30407149


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045035Beta vulgarisPrunus dulcis26.539.5689.2365forward
CNT30511491Beta vulgarisSolanum lycopersicum27.767.9388.2468reverse complement
CNT30172694Beta vulgarisTrifolium pratense25.3113.6988.7162reverse complement
CNT30139987Beta vulgarisLolium perenne28.988.8287.3271forward
CNT30230643Beta vulgarisAnanas comosus27.358.8689.5567forward
CNT30338816Beta vulgarisEragrostis tef27.359.4486.5767forward
CNT30337803Beta vulgarisCynara cardunculus23.273.1794.7457forward

Expression of CNT30407149

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MPKYQVGSFVFLLIVTTGLLNILFSFFYFFLFVYNAAI

Sequence

>CNT30407149
ACCCAAATACTGATTCAAATTAAAAGGGATATGTAATAGAAAGTTTAAAACTGCTTAATCCCTATTTTTTTTTTCGGATTCGGAAGATAGTAAGCAATAA
AAATCCGAAAGTTCTTCTTTGTGGTGATAATGCCAAAATATCAAGTCGGCTCATTTGTCTTTCTCTTGATTGTTACTACGGGCCTCTTGAATATTCTCTT
TTCCTTTTTTTATTTTTTTTTATTTGTGTATAATGCAGCTATTTG