Detailed information on CNT3040650


BLAST search results

BLAST vs Swiss-Prot:
sp|P15195|CB23_POLMU, E-value = 2e-103

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30330082Marchantia polymorphaDioscorea rotundata21.2952.9983.8284forward

Expression of CNT3040650

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MTKRFTSNILYTSSLTVNLKRRSQPRQINLSRVE*

>peptide 2 (29 aa)
MAHREWITSSSRFLAKVSGSAESPAVSQP*

>peptide 3 (36 aa)
VGNTYLLQVHHVHTPALFIDTTLIDNVDHLSILLQN*

>peptide 4 (37 aa)
MMRVIELGTMRIPLNISTVTVAIIIKLQKIFWTKDIV*

>peptide 5 (39 aa)
MGPSTWVGPHHTFKKESRRIRLISKCRDDDHQITNDEGD*

>peptide 6 (63 aa)
MLDGADPLRITTRASPTLTFLASSLLEAPRACPAKKVDAQAVAVAILIVVRTLRKLTSVQQQLE

Sequence

>CNT3040650
TGTAGGTAACACATATTTATTACAAGTACATCATGTACATACGCCCGCTCTGTTCATAGATACAACTTTGATAGACAACGTCGATCATCTGTCAATTCTA
TTACAAAACTGAAGACAGGTCTTATAATTTCACAAGAGGAGTCTTGACGAGAAAGCTCACATGATTGGTTCGATCACACCGGGGTGGACTCACAGTCACT
GGGAGTGCTCATCTAAAACTTGAAGTATCGGCTAATTGTCTATGATCCGGGGGTGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTCACAGTCGGGTCAGCC
AAGTGGTCGGACAAGTTCTCGATCGGGCCCTTGCCGGTGACAATAGCCTGAACGAAGAATCCGAACATGGAGAACATGGCAAGTGTCTGGGTCCTCAGCC
AAGTTCAGGGGGTCGAATGAGCCTCCGGGGTAGATTGGGTCGACAACATCACCCAAGGGTCCTCCTGCCACTCTGTATCCCTCGATGGCTCCCATGAGCA
CGACCTGGCAGGCCCAGATGGCCAGAATGCTCTGCGCGTGGATGAGGCTCGAGTTGCCGAGGTAGTCCAAACCTCCCTCAGCGAAGATCTGGGATCCGGC
CTTGAACCATACTGCCTCGCCGAACTTCACTCCGTTCTTCGACAGCAGCTCGGGGGTCACACATCCCAAAGCTCCCAACATGGCCCATCGGGAGTGGATC
ACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGATCGGCAGAGAGTCCGGCGGTGTCCCAACCGTAGTCACCGGGGAATTCACCGGTCAAGTAGCTTG
GGGTGGCACCGGAGAATGGGCCCAAGTACTTGGGTCGGTCCTCACCATACCTTCAAGAAGGAATCACGCAGAATTAGACTGATTTCGAAGTGTCGAGACG
ATGACCATCAGATAACAAATGATGAGGGTGATTGAGCTAGGGACGATGCGCATTCCTTTGAATATTTCAACAGTCACGGTAGCAATCATCATTAAGCTGC
AGAAGATTTTCTGGACAAAGGACATTGTATGACAAAGCGGTTTACTTCGAATATTTTATATACATCTTCACTAACTGTAAACTTGAAAAGGAGATCACAG
CCAAGGCAAATAAATTTGTCGAGGGTTGAGTAGCCACCAGATGCTGGATGGAGCAGATCCTTTGCGCATAACAACGCGGGCTTCACCGACGTTGACTTTC
TTGGCGAGCTCATTGCTGGAGGCTCCGAGAGCCTGTCCAGCCAAGAAGGTAGATGCGCAAGCTGTTGCTGTGGCCATCCTGATAGTCGTAAGAACACTTC
GCAAACTGACTTCTGTGCAGCAACAGTTGGAACG