Detailed information on CNT30405825


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532226Beta vulgarisEucalyptus grandis66.3821.0283.55152forward
CNT30547527Beta vulgarisIpomoea triloba44.123.3384.16101forward
CNT3019597Beta vulgarisCitrullus lanatus63.7619.5287.67146forward
CNT3045373Beta vulgarisPrunus dulcis57.2116.7189.31131forward
CNT3059659Beta vulgarisArabidopsis lyrata41.4821.8989.4795forward
CNT30345702Beta vulgarisEragrostis tef64.6318.3286.49148forward
CNT30361520Beta vulgarisSorghum bicolor44.114.7789.11101forward
CNT30596122Beta vulgarisOryza meridionalis33.6211.1385.7177forward
CNT30359537Beta vulgarisLactuca sativa25.768.9589.8359forward
CNT30154011Beta vulgarisPrunus persica57.2146.6289.31131forward
CNT30332479Beta vulgarisDioscorea rotundata38.4331.182.9588forward
CNT30100260Beta vulgarisOryza rufipogon63.7620.3385.62146forward

Expression of CNT30405825

Peptides detected in this lncRNA

>peptide 1 (70 aa)
REVRLDVVEGSTRSLHFLKHVPTLLIQNTVDTTESVFRSLDLNKVDGLQQSGLGTLSTWAKVYPFDHSCK*

Sequence

>CNT30405825
ACAGGGAGGTACGCCTTGATGTTGTAGAGGGGAGTACCAGGTCTCTGCATTTCCTCAAACACGTGCCCACGCTTCTGATTCAGAACACTGTAGATACCAC
CGAGAGCGTTTTCAGGAGCCTGGATCTCAACAAGGTAGACGGGCTCCAACAATCTGGGCTTGGCACTTTGTCAACATGGGCCAAAGTTTATCCTTTTGAT
CATTCATGCAAGTAGCGATGATCTGTTTG