Detailed information on CNT30405511


BLAST search results

BLAST vs Swiss-Prot:
sp|P49315|CATA1_NICPL, E-value = 1e-118

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30282684Beta vulgarisChenopodium quinoa25.4587.3386.17441forward
CNT30709372Beta vulgarisGlycine max5.1425.0784.2789forward
CNT3080335Beta vulgarisBrassica juncea7.6223.2883.33132forward
CNT30624929Beta vulgarisDaucus carota5.6528.3282.6598forward

Expression of CNT30405511

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MQSTRKGLESRGCGFHLQLEWLLPRANSFHRKLGANGISRMLLCRLC*

>peptide 2 (49 aa)
MNISCYNRSQTYITTGYKVKEIQANTKVTTNLLYIRPLYCNFVTPAVVA*

>peptide 3 (50 aa)
MVRKLLRIIILVVIHSQSSHGCKGKISSGHVLVISSGSKSNLSSSFGSIV*

>peptide 4 (92 aa)
MASSSSKFFSPQVGRQWNFTYVTLPALLIRVKVLRDSGRYEQKSMYLQLSWMWDFGLGLNARTRSKNCIASRVKNTGKLFPTISKLPCNMFV*

>peptide 5 (36 aa)
ILYNESSIIQDIDGQSCTSTSVAVNIMHLLRKRGTI*

>peptide 6 (43 aa)
MYTLMGPSCYLFYQMIIFQQNGTCLLFSYQHHVSSLTCTTIDP*

>peptide 7 (47 aa)
MEFHVCYFAGFVDKGEGVERLWEVRTEIHVPPTFLDVGFWVGFECSD*

Sequence

>CNT30405511
ACATATTATACAACGAAAGTAGTATAATACAAGATATTGATGGTCAAAGTTGTACATCAACAAGTGTAGCAGTCAATATAATGCATCTGTTAAGAAAAAG
AGGAACTATTTAGGAGAAAAGGATGCATATATGTTTATATCATGCCTAATAGGAATGTTCCGATTGATACAAATAGTAATACAACATTAACAAACCAACG
AACTTTCAAGAAAGTCGCATGAACATAAGTTGCTACAATCGTTCACAAACATATATAACGACAGGTTACAAAGTGAAAGAAATTCAAGCAAATACAAAGG
TAACGACGAATCTTCTTTACATACGTCCATTATATTGCAACTTTGTGACACCAGCAGTAGTAGCTTGACCTTTACTTCCGCTTATTATATGGTTCGGAAG
CTCTTGCGGATCATAATATTAGTAGTAATTCACAGTCAGTCTTCACATGGTTGTAAGGGCAAGATATCTTCAGGCCATGTTTTAGTCATATCAAGTGGAT
CGAAATCGAACTTATCCTCATCATTCGGATCCATAGTCTGAATGTAAAGCTTCCATTCTGGGAAGTTACCCGATGCAATCGACTCGTAAAGGTCTTGAGT
CGCGTGGCTGTGGTTTTCACCTCCAACTCGAATGGCTTCTTCCTCGAGCAAATTCTTTTCACCGCAAGTTGGGCGCCAATGGAATTTCACGTATGTTACT
TTGCCGGCTTTGTTGATAAGGGTGAAGGTGTTGAGAGACTCTGGGAGGTACGAACAGAAATCCATGTACCTCCAACTTTCTTGGATGTGGGATTTTGGGT
TGGGTTTGAATGCTCGGACTAGATCAAAAAATTGCATTGCATCACGGGTGAAAAACACTGGGAAGTTGTTTCCAACTATATCAAAGTTACCCTGCAATAT
GTTCGTATAGAACTTAACAGCGAAACCACGAGGATCTCTGAGTGTTTCCGGACTACCACGTTCATGAATAACAGTTGAAAACCGAACAATAACTGGCGTC
TGAACACCGGGGGAACGTAGGAAATCAGCACACGTAAGATGTATACGCTCATGGGTCCAAGTTGCTATCTTTTCTATCAAATGATAATCTTCCAACAGAA
TGGGACCTGTTTATTGTTTTCGTATCAACACCATGTTAGTTCTTTAACATGCACAACAATTGACCCATGATGGTGTCACAAGTTCCTAAACGATAATACC
ATTTTCTTTAGAAATATAGCACTTATTGTTAACATTAAATTAGTTGCATACATCAAAATCGTATTTTTTCGAATCTAATAGAACTTAAAATATTACTAAA
TCAGACAAATCATTTGTGTCCTTTCCATATTATTCACAGTCCATAAACCTTATATGTTATATGTTAGGGTAACACTAAAATAACTCAAGTTTACACTTGA
AGTTCCATTTTTCAAAAATGTCTCCATTTTCAAAATCCTAAAACTCCTAGCCATGTCCATGTCCATCCTACATAGCCAACCATAAACCGGCGGGTACCAA
AACTAAGATAACAAAGAAAAAAACATCTGTCGAGTCGGATTGACGAATTAAAAAAAAACAATAGGTATACCTCTGGGGCCAACAGTTAACGAAGAGTTAT
CGTTCCAAACAGGTGTACCATTATTGTTGGTTAAGTACGGGGAATTGTAAGCACTTGCCGGGCGATACTGCAGAAGATCAAACCCAGATCAAATTTGGCC
AAATTTTCAAAACTTTACCAATAATATTTTTAT