Detailed information on CNT30405492


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546130Beta vulgarisIpomoea triloba39.9246.5784.2195forward
CNT30525458Beta vulgarisPhaseolus vulgaris27.313.5887.6965forward
CNT30629770Beta vulgarisVigna unguiculata44.9644.5885.98107forward
CNT30171605Beta vulgarisTrifolium pratense48.329.1883.48115forward
CNT30612587Beta vulgarisArabis alpina27.3118.0187.6965forward
CNT30360105Beta vulgarisLactuca sativa22.276.0290.5753forward

Expression of CNT30405492

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MLLISIFTACMVLDRHRTFKEKLKCWRNKNVSDVIVPWVCQMSSQVFQWTCSWIG*

Sequence

>CNT30405492
TCTAAAGCATATCTCAATGTTTAATCACACAAATATCATTACAAATGCTTCTGATTTCGATTTTTACAGCATGTATGGTTCTTGACCGTCATCGTACATT
CAAGGAGAAATTAAAGTGTTGGAGGAATAAGAATGTCTCCGATGTTATTGTGCCATGGGTCTGCCAAATGAGTAGCCAAGTTTTCCAATGGACCTGTTCC
TGGATAGGCTGATTGCTGAACACAAAATCCAACGAAAG