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Detailed information on CNT3040451


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Marchantia polymorphaOryza sativa30.835.7893.37181reverse complement
CNT30671254Marchantia polymorphaSetaria viridis24.750.3592.41145reverse complement
CNT30550263Marchantia polymorphaIpomoea triloba30.831.5794.48181forward
CNT30637323Marchantia polymorphaCapsicum annuum30.3212.6189.33178forward
CNT3098505Marchantia polymorphaSolanum tuberosum30.8318.4593.92181reverse complement
CNT30309155Marchantia polymorphaTriticum aestivum30.838.1693.37181reverse complement
CNT30396189Marchantia polymorphaTriticum turgidum30.8321.9193.37181reverse complement
CNT30585815Marchantia polymorphaMusa acuminata30.837.4691.71181forward
CNT30147387Marchantia polymorphaMedicago truncatula30.8327.193.92181reverse complement
CNT30435015Marchantia polymorphaAegilops tauschii30.8316.0693.37181reverse complement
CNT30662061Marchantia polymorphaTriticum dicoccoides30.839.4392.82181reverse complement
CNT3081478Marchantia polymorphaBrassica juncea30.8315.6394.48181forward
CNT30143344Marchantia polymorphaLolium perenne30.838.0993.37181reverse complement
CNT3017904Marchantia polymorphaZea mays30.831192.82181reverse complement
CNT30655385Marchantia polymorphaRosa chinensis30.837.6994.48181forward
CNT30203595Marchantia polymorphaHelianthus annuus30.839.8892.82181forward
CNT30360998Marchantia polymorphaLactuca sativa16.3533.194.7996forward
CNT30369805Marchantia polymorphaOryza glumipatula30.8312.6292.82181forward
CNT30420891Marchantia polymorphaPapaver somniferum30.836.7493.92181reverse complement
CNT30323793Marchantia polymorphaAsparagus officinalis16.5230.792.7897forward
CNT30151602Marchantia polymorphaBrachypodium distachyon18.2321.3692.52107reverse complement
CNT30575706Marchantia polymorphaOryza barthii30.837.4392.27181forward
CNT30581589Marchantia polymorphaEchinochloa crusgalli30.8318.5593.37181reverse complement
CNT30116696Marchantia polymorphaOryza nivara30.834.5693.37181reverse complement
CNT30726123Marchantia polymorphaLupinus angustifolius22.323.9591.6131forward

Expression of CNT3040451

Peptides detected in this lncRNA

>peptide 1 (35 aa)
QVSHGDLIVSLGSSHQSAIYLVQLITFRKSILLLV*

>peptide 2 (42 aa)
MRPESAEYKKRLNIHSMDKDFFKYYTELEQAIKNIKHLKWINR

Sequence

>CNT3040451
CTCAGGTTTCTCATGGGGATCTCATTGTATCCCTCGGCAGCTCCCATCAAAGTGCGATATACTTGGTGCAACTAATAACCTTTAGGAAAAGTATATTATT
ATTGGTATAAGAAAAGGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCTACACACGTGCTACAATGGCAATTACAATTGGAAGCAATGCTGTAAGGTG
AAGCGAATCCAGAAAGATTGCCTAAGTTCGGATTGTTCTCTGCAACTCGAAAACATGAAGTTGGAATCGCTAGTAATCGCGGATTAGCATGCCGCGGAGT
ACTCGGGCCCTGTACAAACTGCCCGTCAAACCATGTAAAATGGTATCTACATAAGGTTCGAGAGGTGTTTCAACACTTCCAACCTCCGAAATCTTCCTAC
ATAACTTGGATTGTTATGTCGAAGACATACTCATACCCAACTACAATGTAGAGAATATGCGCCCCGAGTCGGCGGAATATAAGAAAAGGCTTAATATCCA
TTCAATGGACAAAGACTTCTTCAAGTATTATACAGAATTAGAGCAGGCCATCAAAAACATCAAACACCTAAAGTGGATAAACCGCGA