Detailed information on CNT30403755


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223386Beta vulgarisHordeum vulgare20.9213.4291.24137reverse complement
CNT30592666Beta vulgarisMusa acuminata22.2915.0187.67146reverse complement
CNT30439298Beta vulgarisAegilops tauschii20.9214.2391.24137reverse complement
CNT30655399Beta vulgarisRosa chinensis34.9628.5291.27229forward
CNT30683092Beta vulgarisTriticum urartu20.926.291.24137reverse complement
CNT30575481Beta vulgarisOryza barthii17.2521.0491.15113reverse complement

Expression of CNT30403755

Peptides detected in this lncRNA

>peptide 1 (51 aa)
NRGSTPPNSSAPLYRLNHSKGLVGGTGEPRELVRCVGQRARSTPFSFSSLR*

Sequence

>CNT30403755
CAATAGGGGCAGCACACCCCCCAATTCAAGCGCACCTCTGTATCGACTGAATCACTCTAAGGGTCTAGTCGGTGGAACCGGTGAACCACGCGAGCTGGTT
AGATGCGTGGGGCAGAGGGCTCGTAGTACCCCCTTTTCCTTTTCTTCGCTTCGGTAGTGAATCACCCACTAAAAAAAGAGGCAAGCCTGCGCGCTCTATT
TGAGACTACTAAGGCGGGCGTGCCTTAGGGTGTGTTTATCCCTCAGACTCAAACCCAAACTTCAGACTGTGCCACATCAGCTTTCCACTAATTTTTATCT
ACTTTTTATTCTTCAGACTCACTCCAGACTCATTCCAGTTTTACACTTTATCCCTCAGACTCTCTCCAGACTCTTTATCAAAAGTTTAACATATTATTTT
ATATTTAATCATTTTCATGTTTTTTTTTCTATAACATTATTAACTTAATATGTTATGAGCATATATAGTTTAATTATTTACTAATTATTATAACATTAAA
ATAACAATTTATCTAATTATTTATTTAAGATTACACGAAATAGTAAATTACACACGAAATAGAAAAGTACACACGAAATAAAAAATTACATACGAAATAG
AAAATTACACACGAAATAGAAAATTACACACGAAATAGAAAATTACACACGAAAT