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Detailed information on CNT30403423


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M3J5|TI214_SPIOL, E-value = 7e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3027120Beta vulgarisPopulus trichocarpa16.1932.7487.8474forward

Expression of CNT30403423

Peptides detected in this lncRNA

>peptide 1 (55 aa)
QSFLEHMIQDLLYLRGHFRLDSHSLIQIQDLLYLLVHFRLDSHSLIQKIFFHLMV*

Sequence

>CNT30403423
TTCAGAGTTTTCTTGAACATATGATCCAAGATCTTCTTTACTTACGAGGTCATTTTCGTCTTGATTCCCATTCTCTAATTCAAATCCAAGATCTTCTTTA
CTTATTAGTTCATTTTCGTCTTGATTCCCATTCTCTAATTCAAAAGATTTTTTTTCATTTAATGGTATAAAAGCATTTTTTTTTTCTTTCTGTTGATATT
TTTATTTTCATTAAAATTTTCACTTACATTATAATTTGCAAAAAGAAGATTAAATGGTATAATCCAAGGTTTCAGTTTATATGCATTATAAAATAATAAA
AATTCGGAGAAAAACCAAAATTCCAGATTTGATATGAGATGACTTAGTATTTCTTCGTTCATTCCCATCCAATCAAAAAGGTATTTTTTATGGGATCCCC
CGATTTCTTGATAAATTGTACTATAAAAAACACTTTTATTATCAATTTGATCTATAA