Detailed information on CNT30403246


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535090Beta vulgarisEucalyptus grandis43.8819.0886.89183reverse complement
CNT30200508Beta vulgarisPisum sativum15.8329.698.4866reverse complement
CNT3084074Beta vulgarisVigna radiata14.3922.1488.3360reverse complement

Expression of CNT30403246

Peptides detected in this lncRNA

>peptide 1 (29 aa)
FMGRANKFELYKLSIPKMMALVYREDLTV*

>peptide 2 (45 aa)
MSKKRQKIVVGKVIVAKAIGIFILYIGKIRFVIDRPGEKKNNSKK*

Sequence

>CNT30403246
ATTCATGGGTAGAGCCAACAAGTTTGAACTGTACAAGTTATCGATTCCGAAAATGATGGCTCTGGTGTATAGAGAGGACCTCACCGTTTAAAAAGTAACC
ATAGAAACGAAGGAACCCACTATTTCTTTGATCGTCTGTATTTAATTTGTCTTGTTTCAAAGCGAAATGTCGAAAAAAAGACAAAAAATAGTGGTTGGGA
AGGTTATAGTAGCAAAAGCCATTGGAATTTTTATTTTATACATTGGAAAAATCCGGTTTGTTATTGATAGACCGGGGGAAAAAAAGAATAACTCAAAGAA
ATAAAATCAATTAGTTATTCATCAAAGTTTCATTTATTCAATGACTAGAGTTAAACGAGGATATATAGCTCAAAGATGATGAAAAAAATTTGTTTATTTG
GATCAAGCTTTCGAGGG