Detailed information on CNT30403088


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 1e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30276136Beta vulgarisChenopodium quinoa30.1825.4493.13131forward
CNT30144767Beta vulgarisMedicago truncatula20.5113.3885.3989forward

Expression of CNT30403088

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLLEGSLRNSATLLRGPFPVAAAWMAKPRNATIARRECLISANCR*

Sequence

>CNT30403088
ACACAGTACAAGTAAATTGCACAATTAATTAACATCCTCATTCATGTTGTGAAACTTGGAAGGACTAAAAGAATAAAAGGGAGTGAGGATGATTTTAAGA
GATAACAAGATGAATAAGACATAATAATAACTCCTAATAATAGGAGTATATTGTTATGTATCTTAAGAGAAAGTTTTGAGGATGTTGTTAGAAGGATCAC
TCAGGAATTCAGCAACATTGCTAAGAGGGCCTTTTCCGGTGGCAGCAGCTTGGATGGCGAAGCCAAGGAACGCAACCATAGCGAGGCGGGAGTGCTTGAT
CTCCGCCAACTGTAGGTAGAGGCGCTTCTCTGGATCAAGCTCTGCATTCCTCTGGAACTCAATGTATCCCACTAGTAAAACTTCTATCCAGATCAATGTG
CCAAGGGAGAATGGTAGTTTTTGGCCTAGGTAGG