Detailed information on CNT30403022


BLAST search results

BLAST vs Swiss-Prot:
sp|P84565|CLPA_POPEU, E-value = 1e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30271581Beta vulgarisChenopodium quinoa39.223.7685.7191forward

Expression of CNT30403022

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MCFLYSSRVGILFPVVPPPTPAPTASVFSPTIRIT

>peptide 2 (75 aa)
PKFVMNLITFTKPFQDLYSLIYSWLRNFNRLKPSLKCWIFLNVFSVLVKGWHLISCSTPSNTSTNSFSVFTHHTYN

Sequence

>CNT30403022
TACCGAAGTTTGTGATGAATCTCATAACGTTCACGAAGCCCTTTCAAGATCTGTATAGTCTCATCTACAGTTGGCTCAGGAACTTTAACAGGCTGAAACC
TTCTCTCAAGTGCTGGATCTTTCTCAATGTGTTTTCTGTACTCGTCAAGGGTTGGCATCTTATTTCCTGTAGTACCCCCTCCAACACCAGCACCAACAGC
TTCAGTGTTTTCACCCACCATACGTATAACCT