Detailed information on CNT30402810


BLAST search results

BLAST vs Swiss-Prot:
sp|F4HQ20|LRL25_ARATH, E-value = 4e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514610Beta vulgarisJuglans regia27.046.8188.5496forward
CNT30727197Beta vulgarisCorchorus capsularis26.25.2384.9593forward
CNT30379990Beta vulgarisManihot esculenta23.9421.0485.8885forward
CNT30560303Beta vulgarisActinidia chinensis26.27.5284.9593forward

Expression of CNT30402810

Peptides detected in this lncRNA

>peptide 1 (64 aa)
HHKLTKIIFLSNSLFSLVMISWTTSSSKFSSRLYIHSGKYISQLCSSSFVIFFLPHTRSMSIIP*

>peptide 2 (48 aa)
MDYIFLQVLKSIIYPFRKVHFAAMLIIICYIFSTTYKVYEHHSVAINI*

Sequence

>CNT30402810
GCACCATAAGCTCACCAAGATCATCTTTCTCTCTAACTCTTTGTTCTCATTAGTCATGATCTCATGGACTACATCTTCCTCCAAGTTCTCAAGTCGATTA
TATATCCATTCAGGAAAGTACATTTCGCAGCTATGCTCATCATCATTTGTTATATTTTTTCTACCACATACAAGGTCTATGAGCATCATTCCGTAGCTAT
AAACATCTGATTTATGAGAAACGCCACCAAAATTTCGACAAAATACTTCCGGAGCAATATATCCAATTGTCCCTCTTGCTTCTGACATCGAAATCAGACT
ATTTTTTTGCGGACACAATCTAGCAAGGCCAAAGTCAGATATTTTTGGGCGAAAG