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Detailed information on CNT30402735


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 4e-153

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Beta vulgarisOryza sativa15.7153.3783.64214forward
CNT30675843Beta vulgarisSetaria viridis18.1458.6785.43247forward
CNT30523621Beta vulgarisSetaria italica18.8739.3685.6257forward
CNT30512942Beta vulgarisJuglans regia14.8339.8487.13202forward
CNT30729348Beta vulgarisCorchorus capsularis2943.6579.49395forward
CNT3071729Beta vulgarisQuercus suber15.1273.5786.89206forward
CNT30526134Beta vulgarisPhaseolus vulgaris16.0134.2286.24218forward
CNT30630923Beta vulgarisVigna unguiculata36.2734.7681.98494forward
CNT30712364Beta vulgarisGlycine max16.1555.4288.18220forward
CNT30158908Beta vulgarisPistacia vera38.3331.9580.65522forward
CNT30554909Beta vulgarisOryza glaberrima17.1160.5282.4233forward
CNT30145759Beta vulgarisMedicago truncatula19.9771.7784.56272forward
CNT30250974Beta vulgarisAvena sativa6.7521.484.7892forward
CNT30314068Beta vulgarisCamelina sativa38.8434.8984.5529forward
CNT3061941Beta vulgarisArabidopsis lyrata7.237.6987.7698forward
CNT3082269Beta vulgarisBrassica juncea21.8845.9985.23298forward
CNT30613762Beta vulgarisArabis alpina15.4252.585.71210forward
CNT30652736Beta vulgarisRosa chinensis28.9368.0584.52394forward
CNT30212676Beta vulgarisHelianthus annuus20.7879.7281.27283forward
CNT30625469Beta vulgarisDaucus carota41.7838.0380.84569forward
CNT30348495Beta vulgarisEragrostis tef17.6280.5484.58240forward
CNT30154320Beta vulgarisPrunus persica11.1641.1980.92152forward
CNT30418103Beta vulgarisPapaver somniferum15.4954.187.68211forward
CNT30704690Beta vulgarisPrunus avium37.5225.1585.13511forward
CNT30107297Beta vulgarisOryza longistaminata8.9627.1785.25122forward
CNT3022206Beta vulgarisPopulus trichocarpa15.8639.7185.19216forward
CNT30323609Beta vulgarisAsparagus officinalis40.0132.7383.67545forward
CNT30149846Beta vulgarisBrachypodium distachyon10.9433.6386.58149forward
CNT30113681Beta vulgarisFicus carica11.0120.682150forward

Expression of CNT30402735

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MSTSTSPAASSSMLRPSFNILWMRLPKVLGSSRLNPDVNKAVSCKRRTKSFTDLSFLSASALFLSSSMIGFSGLISMVFLEDM*

>peptide 2 (31 aa)
MSTKQSRAREEPNPSQTCRFCQHQPSFSALP*

>peptide 3 (53 aa)
MLESLKACAFMILSIPSNFSFDSSLFFFSSSLSSSFRPSLVAETSFFPSNSLS*

>peptide 4 (34 aa)
PPTTTQKNSHSSKREHTQHQTGGEKDRECIKKDE*

>peptide 5 (43 aa)
PQLPLKKILIVPKENTLNIKRGEKRIESVLKRTNKELLTTTNQ*

Sequence

>CNT30402735
CCCCCAACTACCACTCAAAAAAATTCTCATAGTTCCAAAAGAGAACACACTCAACATCAAACGGGGGGAGAAAAGGATAGAGAGTGTATTAAAAAGGACG
AATAAAGAACTACTTACTACTACTAATCAGTAAAATCAGAAACAACCTAGAAACACCAAGCTTAGTCGACTTCCTCCATCTTGGATTCCTCAGCATCAGC
TTCCTCGAGGGCTGGCATGTCAACATCGACTTCTCCAGCAGCATCATCATCAATGCTCAGACCAAGCTTCAACATTCTGTGGATGCGGTTGCCGAAGGTG
TTAGGGTCATCAAGGCTGAACCCAGATGTCAACAAAGCAGTCTCGTGCAAGAGAAGAACCAAATCCTTCACAGACTTGTCGTTTTTGTCAGCATCAGCCC
TCTTTCTCAGCTCTTCCATGATTGGGTTCTCTGGGTTGATCTCCATGGTCTTCTTAGAAGACATGTAACCAGCCATGCTTGAGTCCCTCAAAGCTTGTGC
CTTCATGATCCTCTCCATACCCTCAAACTTCTCCTTTGATTCCTCGCTCTTCTTCTTCTCATCCTCGCTTTCATCAAGCTTTAGACCCTCCTTGGTGGCA
GAGACCAGTTTCTTCCCCTCAAACTCCTTGAGCTGACCGACAGCATACTCGTCGATAGCATCAACCATGTACAAAACTTCATAGCCCTTCTTCTTAAGTC
TTTCAAGGAAGGGAGAGTTCTCAACTGCCTTCTTGGTCTCACCAGTGATGTAGAAGATGTCATTCTGGCCCTCCTTCATTCTGGTCACGTAGTCCTTAAG
GCTGGTCATCTCTTCACCGCTCTTGGTGGAGTGGTACCTAAGCAACTCAGCGAGCTTGTTCCTGTTTTGAGTGTCCTCGTGGATACCCAACTTCAAGTTC
TTCGAGAAAGCCTCGTAGAACTTGTTGTAATCATCCTTGTTCTCAGCAATCTCAAAGAAGAGCTCAACACACTTCTTTACAAGATTCTTCCTGATCACCT
TCAAGATCTTGTTTTGTTGCAATGTCTCTCTAGAAATGTTAAGGGGGAGATCCTCAGAATCCACAATACCCTTGACAAAGCTGAGGTACTCAAGTTGGTC
CTCCTTAAGGTAAAGGGTCATCTTAGTTCCCCTGCCAAGGGGCTCACCAGTGGTGTCCCTAGTCACAGTGAAGGAACCACCAGCTTGAGACTCCCACACG
TACTGCTCATCGTCATTGTGCTTTGTTGTGACAATAACCTTCTCAGCAACAAGGTATGCAGAGTAGAAACCCACACCAAACTGACCAATCATGCTCACAT
CAGCTCCAGCAGCCAAGGCTTCCATGAATTCCTTTGTTCCAGACCTTGCAATGGTACCCAAG