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Detailed information on CNT3040273


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30439237Marchantia polymorphaAegilops tauschii12.4129.7984.5284forward

Expression of CNT3040273

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MYHTLLLSNTFILSPCVELIGGVVELHGFSRRELSVSVSIRLGRPERRSYRRRPPRSPFPTRPGRLQESLWVPGN*

>peptide 2 (54 aa)
MQKQSGRSSYVSHPTTLQYFHPLAMCGTDRRCSRIARIQPSGALCLCQYSSWSS*

>peptide 3 (42 aa)
MRFPVIRCIEVLLLSCGDHHLIIKATIAIDLSQTFTLTRAST*

>peptide 4 (30 aa)
GACVLAIHERLRASINWMNKAFSGTVLGLP*

Sequence

>CNT3040273
GGGGCTTGCGTGCTGGCAATACACGAACGGCTTAGAGCGTCAATCAATTGGATGAATAAAGCTTTTTCCGGTACAGTACTGGGACTTCCATGAGATTCCC
GGTGATCAGATGCATCGAAGTACTCCTCCTTTCGTGTGGTGATCATCATCTCATCATCAAAGCGACCATTGCAATAGATCTATCCCAAACATTTACACTT
ACACGAGCGTCTACATGATTCTTCACCGAGGAGGTCGGAAATTCACACTCGCCGATTCCTACAGAAGTACTTTCAAAAAATAGGTTGTTTACTTGTTACA
CAGAATTTCTGGCATGCAGAAGCAGTCAGGCAGATCATCATATGTATCACACCCTACTACTCTCCAATACTTTCATCCTCTCGCCATGTGTGGAACTGAT
CGGCGGTGTAGTAGAATTGCACGGATTCAGCCGTCGGGAGCTCTCTGTCTCTGTCAGTATTCGTCTTGGTCGTCCTGAGCGTCGGTCGTATCGGCGCCGA
CCTCCTCGTAGTCCTTTTCCAACGAGGCCAGGTCGGCTCCAGGAATCACTGTGGGTGCCTGGTAATTAATCCCGCACTTGAATCCCGTTGGGCACCTGCA
CCCCCACCCACTCAATCAATCAATCCATCCTTGCTCCATCTCCACAACAATCTCACCTCCCGATCACCATCACCATC