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Detailed information on CNT30402728


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30688537Beta vulgarisTriticum urartu18.5541.9987.6397forward

Expression of CNT30402728

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLRGRSSESTIPLTKLRYSGINSSQLSMMKTR

>peptide 2 (59 aa)
MSTSTSPAASSSMLRPSFNILWMRLPKVDVEDVILALLHSGHVVLKAGHLFTALGGVKC*

Sequence

>CNT30402728
TAACCACTTGTCTTTAGGCAAAAACTAAATAAAATACCCCCAACTACCACTCAAAAAAATTCTCATAGTTCCAAAAGAGAACACACTCAACATCAAACGG
GGGGAGAAAAGGATAGAGAGTGTATTAAAAAGGACGAATAAAGAACTACTTACTACTACTAATCAGTAAAATCAGAAACAACCTAGAAACACCAAGCTTA
GTCGACTTCCTCCATCTTGGATTCCTCAGCATCAGCTTCCTCGAGGGCTGGCATGTCAACATCGACTTCTCCAGCAGCATCATCATCAATGCTCAGACCA
AGCTTCAACATTCTGTGGATGCGGTTGCCGAAGGTTGATGTAGAAGATGTCATTCTGGCCCTCCTTCATTCTGGTCACGTAGTCCTTAAGGCTGGTCATC
TCTTCACCGCTCTTGGTGGAGTGAAATGTTAAGGGGGAGATCCTCAGAATCCACAATACCCTTGACAAAGCTGAGGTACTCAGGGATCAATTCCTCACAG
TTGTCCATGATGAAAACACGGCG