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Detailed information on CNT3040272


BLAST search results

BLAST vs Swiss-Prot:
sp|O65493|XCP1_ARATH, E-value = 7e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221137Marchantia polymorphaHordeum vulgare10.7927.9688.1459forward

Expression of CNT3040272

Peptides detected in this lncRNA

>peptide 1 (86 aa)
HCALLSPIDGSREVLHVSVAEVGRILLPAKSSFLSIQLDTEVSAAILLVGEICESVEPERERALLAVVGVYVLQIVLEHLHPVRPL*

>peptide 2 (86 aa)
MLTCPGAEQAAQPLVGQQVLRCVSNYRELPIESACGSSRYGRQHHQATQQSCYRNTSCSNCHHRSTPSAANSLSFPSAADGGHGEHQ

Sequence

>CNT3040272
GCCACTGCGCCCTTCTCTCTCCAATCGATGGAAGCCGGGAGGTCCTTCACGTTAGCGTAGCGGAAGTTGGTAGGATTTTGCTGCCGGCGAAGAGCTCTTT
TCTCTCGATCCAACTTGACACCGAGGTAAGCGCTGCGATACTCCTCGTTGGTGAGATCTGCGAATCGGTTGAGCCCGAGCGCGAACGAGCTCTCCTTGCG
GTTGTGGGCGTCTATGTACTGCAGATTGTCCTTGAACACCTGCATCCTGTGCGACCTCTCTGACTCTCCATTGTAGCTCTTCTGATGCTTACTTGCCCAG
GCGCTGAACAAGCTGCCCAGCCTCTCGTCGGACAGCAAGTCCTCCGGTGCGTATCCAACTATCGAGAACTCCCCATCGAGAGCGCTTGCGGCAGCTCCCG
CTACGGCCGTCAGCACCACCAAGCTACACAACAGAGCTGCTACCGCAACACCAGCTGCTCGAACTGTCACCATCGAAGCACACCGTCGGCCGCGAACTCC
CTCTCCTTCCCGTCTGCTGCTGACGGTGGACACGGCGAGCACCAAGG