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Detailed information on CNT30402626


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315343Beta vulgarisCorylus avellana8.8220.1488.3786forward
CNT30275131Beta vulgarisChenopodium quinoa20.5116.7689.5200forward
CNT3043425Beta vulgarisPrunus dulcis13.3321.1488.46130forward
CNT3081457Beta vulgarisBrassica juncea7.2832.8785.9271forward
CNT30601253Beta vulgarisFraxinus excelsior11.5949.1386.73113forward

Expression of CNT30402626

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MFVLYLKVELVCHHLTIATLHHQFFEGEKRSIIHNRVSYSCCFCIFSTVRNSIRNSHVVFFHATVYYLPKMQNAFTS*

>peptide 2 (72 aa)
MNWVQRKIYLYNVTFGLYMLDWWERYLFNTLIIVLMWFIFYNGSRQLSEFWKSSLGYARSQSSVKGHLWGGA*

Sequence

>CNT30402626
AAAAAAGTGGGACATAGATCTAACATTTAAAATGAAGTACTTCAATGTATTCTAGCAGCCATTGTAGAATTATCAATTCTTAAAAAGAAAGAAACGAAAA
CATAGAAAAGAAGAAGTGTTTAAACCTAATTCTCTAAATTTGAATCCGAAAATTCTGCTGTGATTACAAGGGAAATTCTAACTTTTTCTACAGATTACAG
ATTTCATTTCTTTAGAATCTGAAAAGTTAGATTTCGATTTCCGAATTTCCAGGTCTTGGTATTCAAGCTACCATGAATTGGGTACAACGCAAGATTTATC
TTTACAATGTAACTTTTGGACTCTATATGTTAGATTGGTGGGAGCGTTACCTTTTCAATACACTAATCATTGTCTTAATGTGGTTTATTTTTTACAATGG
ATCTCGACAATTGTCCGAATTTTGGAAGAGTTCTCTTGGCTATGCTCGCTCTCAATCATCAGTGAAAGGGCATCTTTGGGGTGGTGCATAGATACCTTAA
CCTACAACGGGATCAAGGCCAAAGTTCGGACATGATGTTTGATCTGCTGGAAAAAAAACCGGGTAGATCCCCATCAATGTATCTTTTGTGATAGTTATTT
TGAGTCCTTAATTTTGTATTTGTCTATTTTGTAGTTCATTGTTCTGGTTTTTTCAGTTGTAATCATATATTATCGATCCTTGTACTAGTTCCATGTTTGT
ATTGTATTTGAAAGTGGAACTAGTGTGTCATCATCTTACAATTGCAACCCTCCATCATCAATTCTTTGAAGGAGAAAAGAGATCAATAATACATAACCGA
GTTTCTTACTCTTGCTGTTTTTGCATATTCAGCACAGTTAGGAACAGTATTCGGAACTCGCACGTAGTCTTTTTTCATGCTACTGTTTATTATCTCCCCA
AAATGCAGAATGCCTTCACTTCATAATAATTCTTGTTGTTCATGAAATATAGTACATTTTGTGATTTTTGAGCTT