Detailed information on CNT30402231


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376783Beta vulgarisArabidopsis thaliana22.017.7286.7668forward
CNT30382472Beta vulgarisManihot esculenta28.829.1887.6489forward
CNT30711674Beta vulgarisGlycine max49.195082.24152forward
CNT30235645Beta vulgarisBrassica oleracea23.323.4588.8972forward
CNT30172422Beta vulgarisTrifolium pratense35.634.8185.45110forward
CNT30479039Beta vulgarisArabidopsis halleri33.6633.9984.62104forward
CNT30175002Beta vulgarisVigna angularis30.7431.7788.4295forward

Expression of CNT30402231

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MVEHGSSKLDRILGLALRWPALSKLGVDPWALGERLSLLDPRVEGIA*

Sequence

>CNT30402231
GTCGAGCTCTGTAGCGTGAGCTTGTGACCCAAGTGGGGACATTAAGATGGTGGAACATGGATCCAGTAAACTGGATCGGATCTTGGGCTTGGCTTTACGT
TGGCCTGCCCTGTCCAAGTTGGGAGTTGATCCATGGGCCTTAGGCGAACGCTTGAGTCTCTTGGATCCTAGAGTGGAGGGTATTGCGTGAGGCTGGTTTC
ACAGAGCAACGACAACCTCCCACTTCTGTCAGTGGACGGATAACGGGCTGGTGCCTACCGGATCCATTAGTGTCCAGTTGGCTTAGATCTCCATTGGACC
ACCATTTTT