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Detailed information on CNT30401571


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317123Beta vulgarisCorylus avellana7.7130.188.7162forward

Expression of CNT30401571

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MSYMKLVNQQKGDFIPQTQFQTSDCATSAFHYFLILHTHFRLILVLYFIP*

Sequence

>CNT30401571
CACAAATTAGTTACATCAATTTAGTGATCAATGTCATATATGAAGCTAGTAAACCAACAAAAGGGTGACTTTATTCCTCAGACTCAATTCCAAACATCAG
ACTGTGCTACATCAGCATTTCACTACTTTTTAATTTTACATACTCACTTTAGACTCATTCTAGTTTTATACTTTATCCCTTAAATCTTCTCCAGTCTCAC
TCCACATTACTTTAACATTAAAAAAAAAGAGACAAATGGCATTTTTTGGTTGGGCAAAGAAAAGTAAAATTTTCTTTGAAGCAATACCATAGTCTTGAGT
AGAGTTTGGTATTTAAAGACTCTCTTCAAGACTTTACAAGACTTCACCTTACTTTATCGCCAATATGCTATTGGTCTTGTAAGAGTCTTTGCCAAAGACT
CACCTCCAAACCCTGCGATAAACTCACCCTAAGTACCAAAACTTATTCTGAATTTGCTGGTTCGTTCTCATCGCCTGATTTTCACTTATTAGAAGTTATC
TTAACTTATTCGCCTTTATTAAACTTGAACTTAATTGATCTGAATTTATTTTCTTAACCTTTACTAGGCTGAGTACTTTACCTGATTAACTTCTCATTAG
TGACATAATAATGTACAGAAATCAGTTTTGGACGATAGATTAGGGACTTTAATTATCAACATAATCAAGTTTAAGAGAGAAACCTTAAACCAGACAGCTT
CAGGACCGCAGTTAGCGCCAAATTTGTTGAAGGCTTCTGGGATAATGAAACCAGCTGCACCAAGCATGGCCCAGCGGGCGTGGATCAACTCATATGCTTG
GTAT