Detailed information on CNT30401447


BLAST search results

BLAST vs Swiss-Prot:
sp|C0HJY2|PRVN_THEPV, E-value = 2e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695531Triticum turgidumOryza sativa36.8241.8585.2695forward
CNT30239993Triticum turgidumAvena sativa34.527.5586.5289forward

Expression of CNT30401447

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PRLVQSGCLEEVIRIDFHRVLANKPIDTHW*

>peptide 2 (70 aa)
TLGLSRAAALKKSSALTSIGFLQTNPLTRTGECMSATQKSWSGPGSEAMACHETKARRAARRRMEEEVAI*

>peptide 3 (33 aa)
MRPRQEEQQGEGWKRRLPFDFSIVGSSFLLCSCL

Sequence

>CNT30401447
ACCCTAGGCTTGTCCAGAGCGGCTGCCTTGAAGAAGTCATCCGCATTGACTTCCATCGGGTTCTTGCAAACAAACCCATTGACACGCACTGGTGAATGCA
TGTCGGCGACACAAAAGTCCTGGAGTGGGCCAGGGTCGGAGGCAATGGCCTGCCATGAGACCAAGGCAAGAAGAGCAGCAAGGAGAAGGATGGAAGAGGA
GGTTGCCATTTGACTTTAGTATCGTTGGCTCTTCTTTTCTCTTGTGTTCCTGTTTGTG