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Detailed information on CNT3040143


BLAST search results

BLAST vs Swiss-Prot:
sp|P27492|CB21_TOBAC, E-value = 3e-99

BLAST vs NONCODE:
NONBNAT007398, E-value = 9e-27

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30326027Marchantia polymorphaAsparagus officinalis5051.4982.94293forward

Expression of CNT3040143

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MGSTTSPKGPPATLYPSMAPMSTTWQAQMARMLWAWTRLELPR*

>peptide 2 (42 aa)
MASHLLASSKCLISQLKDFRLVSGGEGGGVGVWVLSQVQGVE*

>peptide 3 (29 aa)
MAHRAWITSNSRFLAKVSGSAESPAVSHP*

>peptide 4 (45 aa)
SFEVTYEATIYTWCRRTFEFHGKPSPRQLQMPNLTAEGFSSSFRG*

Sequence

>CNT3040143
AGCTTTGAAGTAACCTACGAAGCAACTATATACACCTGGTGCCGACGGACTTTTGAGTTCCATGGCAAGCCATCTCCTCGCCAGCTCCAAATGCCTAATC
TCACAGCTGAAGGATTTTCGTCTAGTTTCCGGGGGTGAAGGTGGTGGCGTAGGTGTCTGGGTCCTCAGCCAAGTTCAGGGGGTCGAATGAGCCTCCGGGG
TAGATGGGGTCGACGACATCACCCAAAGGACCTCCTGCTACTCTGTATCCCTCGATGGCTCCCATGAGCACAACCTGGCAAGCCCAGATGGCCAGAATGC
TCTGGGCGTGGACGAGGCTCGAGTTACCGAGGTAGTCCAAACCTCCCTCAGCGAAGATCTGTGATCCAGCCTTGAACCACACTGCCTCTCCGAACTTCAC
ACCGTTCTTGGCCAACAACTCGGGGAAGACGCATCCCAGAGCTCCCAACATGGCCCATCGAGCGTGGATCACCTCCAATTCACGGTTCTTGGCGAAGGTC
TCGGGGTCAGCAGAGAGTCCTGCAGTGTCCCATCCGTAGTCACCGGGGAACTCACCAGTCAGGTACGAGGGGGTAGCTCCGGAGAA