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Detailed information on CNT30401184


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616920Triticum turgidumSesamum indicum40.453.4387.74522forward
CNT30638683Triticum turgidumCapsicum annuum39.5599.0390.41511forward
CNT30136065Triticum turgidumLolium perenne49.92100.4797.98645reverse complement

Expression of CNT30401184

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MDRSPRFGSISSDNRPIKTRFRYGSGGFRVFSLARWSLLIHTGFHVPHATRVRA*

>peptide 2 (67 aa)
CISYILQRRSAWYEPRGEAIASPRGSYFSAAALGTRTSARGIFSTPSYPEKAGSPCVLKPITIFRLT*

>peptide 3 (54 aa)
MSSQLLRLNAFRGEQASSGFEWHFTPNHNSSADSSTSVGSDLCLVSSKLHPGHG*

>peptide 4 (34 aa)
MFSLLKPTFSLPLRRPPLSRLLPSKAERSPTDAF*

>peptide 5 (61 aa)
SASVTYFSAVAPGMSLVEKQSLVHGAHTSALQRLVLGPRLEAFSLPLLTLKKQGHLVSLNL*

Sequence

>CNT30401184
TCTGCATCAGTTACATACTTCAGCGCCGTAGCGCCTGGTATGAGCCTCGTGGAGAAGCAATCGCTAGTCCACGGGGCTCATACTTCAGCGCTGCAGCGCT
TGGTACTCGGACCTCGGCTCGAGGCATTTTCTCTACCCCTTCTTACCCTGAAAAAGCAGGGTCACCTTGTGTCCTTAAACCTATAACCATCTTTCGGCTA
ACCTAGCCTCCTCCGTCCCTCCGTACCAACAAGGGGTAGTACAGGAATATTGACCTGTTGTCCATCGACTACGCCTTTGGGCCTGATCTTAGGCCCTGAC
TCACCCTCCGTGGACGAACCTTGCGGAGGAAACCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCGACATTCTCGCTTCCG
CTTCGTCGACCCCCGCTTTCGCGGTTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTGACATCCCACAGCTTCGGCAGATCGCTTAGCCC
CGTTCATCTTCAGCTCAAGGGCGCTCGATCAGTGAGCTATTACGCACTCTTTAAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTTTGCACCCCC
ACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCG
ACCTTGACCCCTGTTATTTTTGGGTCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCGCGCAGCCCGCACCGAAACAGTGCTTTACCCCTA
GATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACAAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGAT
TCTTCAACATCAGTCGGTTCGGACCTCTGCTTAGTTTCATCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAAT
CGCCCTATTAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCC
ATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGCTACTGGACTTTAGCCATCTAGGGTGCGGCACTCAACCGCTTCGCCTAGCAGCACAACGC
TTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCACTTTTGCTTTCTTTTCC