Detailed information on CNT30400799


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595147Triticum turgidumEragrostis curvula73.0653.1998.051744reverse complement

Expression of CNT30400799

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPLTVPINHYSDPEGQHNRTGIL*

>peptide 2 (49 aa)
MDFSRRRGWRTAPVSVIRTLHRTIQSVGATGGVYKGQGRSQRELMTRAY*

>peptide 3 (41 aa)
MRPVLLFIVTTSPCQDWVICAPAAFLGCGSRFSGSLSGIEP*

>peptide 4 (56 aa)
MPVEGSSRSVLAVRRTGRPGPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

>peptide 5 (50 aa)
MMLSHANVSRAMACFEHSNFFKVTMPETRPGQLRLGARCRLKGRVGRCSP*

>peptide 6 (93 aa)
MRPSQKSGFVARISSRITTVIRVARTIKQTITDLMSHSQFHSSNWFILARISSRITTVIRVARTIKQTITDLMSHSQFHSSNWFILAHAWLNL*

>peptide 7 (31 aa)
MTRARSVLVRVTTMILPQVHLRKPCYDFSFL*

>peptide 8 (42 aa)
PGIAFRYVLHRCESRDIRCRESCGLNSFATRGTASKLDMPPG*

>peptide 9 (43 aa)
MIRFNGLLATSGVANRPRLRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 10 (30 aa)
MMRRRHEGRAIRRVIMNHRISEQSPRQPFI*

Sequence

>CNT30400799
CCAGGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTGTGGATTAAATAGCTTTGCAACACGAGGGACGG
CTAGCAAGCTAGACATGCCCCCGGGTTAGNNNNNNNNNNCAATTCACACCAGGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCC
GTTGCCGAGAGTCGTGTGGATTAAATAGCTTTGCAACACGAGGGACGGCTAGCAAGCTAGACATGCCCCCGGGTTAGGCACAGTGTTCCTTGACGCCTTC
GGCGCCGTGGGTTCTTTTACCCCGAGCCCCCACCCGCTCCGAGGAGGGGAGGTGGTCGAGGCATTGGCCGAGCGACGGACGGTGCCGTCGCCGACGGACG
GTGCCGTCGCCGACGGATTGGATGACGCGTGCGCGGTCTGTTTTGGTCAGGGTCACGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACG
ACTTCTCCTTCCTCTAAATGATAAGGTTCAATGGACTTCTCGCGACGTCGGGGGTGGCGAACCGCCCCCGTCTCCGTGATCCGAACACTTCACCGGACCA
TTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGCATTCCTCGTTGAAGACCA
ACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATTACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCG
CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGCCTAAACGGCGATAGTCCCTCTAAGAAGCTAGCTGCGGAGG
GATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCAC
CCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACGC
CTGGTGGTGCCCTTCCGGCAATTGATTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGT
CCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTA
ATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCTGACTGTCCCT
ATTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCA
CTCTAATTTCTTCAAAGTAACGATGCCGGAAACACGACCCGGCCAATTAAGGCTAGGAGCGCGATGCCGGTTGAAGGGTCGAGTAGGTCGGTGCTCGCCG
TGAGGCGGACCGGCCGACCCGGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTG
GCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAATGCGCCCGGTATTGTTATTTATTGTCA
CTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT
CTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAAGGACGTGCGA
TCCGTCGAGTTATCATGAATCATCGGATCAGCGAGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCAGAAGTCGGGGTTTGTTGCACG
TATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCAAATTGG
TTCATACTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTC
ACAGTTCAAATTGGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAAGTAGCAC