Detailed information on CNT30400777


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000308, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678825Triticum turgidumSetaria viridis56.299.8997.531821forward
CNT30177693Triticum turgidumSecale cereale59.296.6298.231918reverse complement
CNT30309180Triticum turgidumTriticum aestivum75.1510098.732435reverse complement
CNT30219940Triticum turgidumHordeum vulgare64.4886.4395.982089reverse complement
CNT30143168Triticum turgidumLolium perenne63.6486.196.752062forward
CNT3018062Triticum turgidumZea mays57.3178.3997.361857reverse complement
CNT30585666Triticum turgidumEchinochloa crusgalli54.5710098.361768forward
CNT30557558Triticum turgidumPanicum hallii57.559.3197.691863reverse complement

Expression of CNT30400777

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWRLEDDQIPS*

>peptide 2 (51 aa)
MHGRRLGWFDRLLATKRMSSFGPVSADRSPVVLRPTTGAVSRPSCGFESLD*

>peptide 3 (80 aa)
MSRRYAITKVLARSRVRLVRNSDPTAEGSSGNRKVPRCVHDPTDGKQSQRCPSNVASGKTLPLGGNVIAVPVPCTSQVKF*

>peptide 4 (56 aa)
MPSKRESSAHVDYVPALCTHRPSLLPIEWSGEVFGSRRRGRFTAPDVARSPLNLII*

>peptide 5 (29 aa)
MSSLLAVPRVAKLFNPHDSRQRISRLSHR*

>peptide 6 (30 aa)
MSCAAQERQPARLLPLSFHESGSAERWPCW*

>peptide 7 (33 aa)
MPTRDRRMLLIGLRRHLMRNQSLWVPGGVWSQG*

>peptide 8 (36 aa)
MITRRIARPSCPRRIIQISALSTFDGRIGAYHGGDG*

>peptide 9 (43 aa)
MSLQCRLRKNVAPRWQRHRCPGPLYVSSEILTQQLNAARETGK*

>peptide 10 (38 aa)
MGGGAWPFLVGGAICLVNFVNERDLSLLTSYAEPSLRS*

>peptide 11 (45 aa)
TRVIFLRENTRVHVRPSFPNVASDVPSLCHHEGVGPVPCTSREKF*

Sequence

>CNT30400777
GAACACGGGTGATTTTTCTTAGGGAAAACACCCGTGTTCACGTACGCCCATCCTTTCCCAACGTTGCCTCGGATGTCCCGTCGTTATGCCATCACGAAGG
TGTTGGCCCGGTCCCGTGTACGTCTCGTGAGAAATTCTGACCCAACAGCCGAAGGTAGCTCGGGAAACAGGAAAGTACCCCGTTGCGTACACGATCCGAC
CGACGGTAAACAGTCGCAACGATGTCCCTCCAATGTCGCCTCCGGAAAAACGTTGCCCCTCGGTGGCAACGTCATCGCTGTCCCGGTCCCCTGTACGTCT
CAAGTGAAATTCTGACCCAACAGCTGAATGCGGCTCGGGAAACAGGAAAGTAGCCCGTTTCGTGCACGATAAGACCGTCCGACAACGTTGCACCGATGTC
CCGATAAAGTTGCCTTCGGAAAATCGTTGCATCCGTAGCTTTATTGCTGCTGGTGTGACACGCGTGATTTGGCCTTGCAGGACGCCTTCGTGCAAGTGAT
CCTCCCGTGCTATGCATGGGCGGAGGCTTGGTTGGTTTGACCGCTTGTTGGCTACTAAGCGCATGAGTAGCTTTGGACCCGTGTCTGCTGATAGATCCCC
CGTTGTACTGCGGCCGACTACCGGCGCCGTGTCCCGTCCCTCGTGTGGCTTCGAATCGCTGGATTAATAGTGCTTGCGTTCTAGTACCCGACCTACGGGA
AGTGGTTCTTCGGATAATTGTTGCCTCGCGGCGGACGCCCATTGGGTGTGCCGCTGCGGCCAAATAGCGCTTGCGGCGTTGCCTCGTGGGGCTGGCACAT
TACGTGCCCGTTGCTATCAAGGCAACCTCGCTCCCGCTTTTGGTCTCGGATGCTGCTCACGATAAAGGGTCGTGGCCCTTTCGGTTGCCTCGACCCGACC
CAAAGCTCTCCGAACTGAGAACAAACGGAACAGGACTTGCCTCTACCTCTCCACAGTTACGTGGTAGGATACGCAACTCTCTGCGCCGATCCTCAAGGAC
GATGAGCTGTGCCGCTCAAGAGCGACAACCGGCCCGGCTGTTGCCTCTGAGTTTCCACGAAAGTGGAAGCGCAGAACGATGGCCGTGCTGGTAGTCACCA
AGGACGTGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACCAATTTGAACTGTGAAACTGC
GAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCT
GGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCTGCTCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCTTCGTGCCCGCG
ACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACAGAGAATTAGGGTTCGATTCCGGAGA
GGGAGCCTGAGAAACGGTTACCACATCCAAGGAAGGCAGCAGGAGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGG
GCGCATTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGC
TCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGCCGGGTCGGCCGGTCCGCCTCACGGCGAGCACCGACCTACTCGA
CCCTTTGGCCGGCATCGCGCTCCTAGCCTTAATTGGCCGGGTCGTGTTTCCGGCATCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTC
TGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGT
ATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGCG
GCTCGAAGACGATCAAATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTATGAGA
AATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGCGTGGAGCCTGCGGCTTAATT
TGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGCAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTT
AGTTGGTGGAGCGATTTGTCTGGTTAATTTCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGCCATCCCTCCGCAGCTAGCTTCTTAGA
GGGACTATCGCCGTTTAGGCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAA
CGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCT
AGTAAGCGCGAGTCATCAGCTCACGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGAT
CGCGGCGACGGGGGCGGTTCACCGCCCCCGACGTTGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTG
AACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAAACAGACCGCGCACGCGTCATCCAATCCGTCGGCGACGGCACCGTCCGTCGCTCGGCCAATGCC
TCGACCACCTCCCCTCCTCGGAGCGGATGGGGGCTCGGGGTAAAAGAACCCACGGCGCCGAAGGCGTCAAGGAACACTGTGCCTAACCCGGCGGCATGTC
TAGCTTGCTAGCCGTCCCTCGTGTTGCAAAGCTATTTAATCCACACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAAT
GCGATACCTGGTGTGAATTGCAGAATCCCGCGAACCATCG