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Detailed information on CNT30400634


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONPOPT000178, E-value = 7e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30578511Triticum turgidumOryza barthii26.459.8792.97128reverse complement

Expression of CNT30400634

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 2 (55 aa)
GSDRAMTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

Sequence

>CNT30400634
GGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAA
TGTCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTG
GTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTACGTT
CAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAAC
CATGCCTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCAC