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Detailed information on CNT3040014


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697376Marchantia polymorphaOryza sativa26.256.0389.8779forward
CNT30524056Marchantia polymorphaSetaria italica24.256.7586.373forward
CNT30139084Marchantia polymorphaLolium perenne46.5116.7183.57140forward
CNT30597047Marchantia polymorphaOryza meridionalis26.258.1389.8779forward
CNT30117945Marchantia polymorphaOryza nivara26.259.0289.8779forward

Expression of CNT3040014

Peptides detected in this lncRNA

>peptide 1 (98 aa)
TMIPGTAGGTRLLSKFKVYLATSSGVALSLHPAPGVTMEGFNKIPSKRTLSCRYRALRRGGSRAQRWARGRCLEKWRRSGQVPRRLPGRRVLMGHWEC*

>peptide 2 (72 aa)
HDSGDGGWDSPPQQVQGVLGNFLRGGSFLASGSGGDHGRLQQNTLEENVVLSIPCSPSRRISGSTMGTRPLS*

Sequence

>CNT3040014
ACCATGATTCCGGGGACGGCGGGTGGGACTCGCCTCCTCAGCAAGTTCAAGGTGTACTTGGCAACTTCCTCAGGGGTGGCTCTTTCCTTGCATCCGGCTC
CGGGGGTGACCATGGAAGGCTTCAACAAAATACCCTCGAAGAGAACGTTGTCCTGTCGATACCGTGCTCTCCGTCGAGGAGGATCTCGGGCTCAACGATG
GGCACGAGGCCGCTGTCTTGAGAAATGGCGGCGTAGCGGGCAAGTCCCCAGGCGGCTTCCTGGACGGCGAGTTCTGATGGGCCATTGGGAATGCTGATGA
C