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Detailed information on CNT30399706


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30306489Triticum turgidumTriticum aestivum98.5773.2598.041175forward
CNT30444168Triticum turgidumAegilops tauschii5.7921.6388.4169forward

Expression of CNT30399706

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MELTEMEKDMVAATRGLFLAERLLVVLKTMLHRFFLCVGCLMTCSSLGKRGWQHLWTAFLVMLLEYRAMISRVKTQVLAFVGCTCNWPF*

>peptide 2 (43 aa)
MGKARAVVGGGEAFSCALLGLWEVPLRPRSRSVRSGTAVAPPP*

>peptide 3 (35 aa)
MSRTESMRSCAAFLGKARLFWTSPWDMSSFRFPWS*

Sequence

>CNT30399706
CATGAGTAGAAAATAGTACCGCGTCGTCCGCTCGGGCGACACGGGCGGCGGAATCCTAGCCACCGCAGAGGCCATCTCTCCATCAATTCCTCCCTCGCCG
CTGCCGGTGGCTGGCATGGGCAAAGCCCGTGCGGTGGTAGGCGGCGGCGAGGCCTTCTCTTGCGCCCTCCTCGGTTTGTGGGAGGTTCCGCTGCGCCCTC
GATCTAGATCTGTTCGTTCTGGGACGGCGGTGGCGCCGCCTCCTTGAGGAGTTCGCCGGGCGCACGGCTGTGAGGCGAGGCAGAGGAAGCGGCAGGCACG
GTGCTGCAGGCCAGAGGCGGAGGCGCGGCCAAGCCCTACGGCGGCAGCGCTGAAACCAGCGTGCTTTGCGGTGCTCATGCCTATTTTGTTCAACCTTGTG
CTTGTCTGGTCTAGAGGTTGACCTTCTCGATCTCATCGTCAGGAGTCAGCCAGCGGTGTGGGGAGTGCTGGATCGACCAGAATAATGGTGGTTTTGGCCT
TGCTGTTCTTCAAGCACTAACTCGTCAATCCACCAAATTTGCCTCCTCGATTGGGACCGTCAAGTTCCGTTCTTCCTCTCAGAGATATTCGCAGCTTGTC
ACAAGATGCTACTGGATGTCTAGAACGGAATCGATGCGGTCGTGCGCAGCCTTTTTGGGCAAGGCGCGCCTCTTCTGGACGTCACCATGGGACATGTCTT
CATTTAGATTTCCATGGAGCTGACAGAGATGGAGAAAGACATGGTGGCTGCGACCAGAGGTTTGTTTCTGGCAGAGAGATTGTTGGTTGTGTTGAAGACA
ATGCTACACAGGTTCTTCCTTTGTGTCGGGTGTTTGATGACTTGTAGCAGCCTTGGCAAACGGGGGTGGCAACACTTGTGGACTGCATTTTTGGTGATGC
TCCTCGAGTACCGTGCCATGATTTCCAGGGTGAAAACCCAAGTTCTGGCCTTCGTTGGTTGTACCTGCAATTGGCCTTTCTGAAGGCATTATTTTGGAAA
CTTGGTCTTTCTTCGGAGTGAAAACTCAAGATCTTCGATCGGGCGACGACAACGCTTGTGTTTTGTTTCCTTCTTGGAGGCGTTGCCTTTGGAGAGCCTA
GTATGTAATACATGTGTTGTATTCGGAGGTGGTTAGAGTGCTTCTGTTGCGAGTGGCTATACACTGCGACGGGGCTTTTTTTTCTTTCTCTC