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Detailed information on CNT30399039


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 8e-97

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689164Triticum turgidumTriticum urartu98.01100.3897.2787forward

Expression of CNT30399039

Peptides detected in this lncRNA

>peptide 1 (69 aa)
DVIATKYHIVELTNARYNIHMNRDEMHQIEANKRKHRITRSCRHNSGLTYLSSSPKLFTTAAILKNNRT*

>peptide 2 (42 aa)
MRRCWSGGMPSLSWILALTLWMVSEDSTSRVMVLPVRLFTKIC

>peptide 3 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLSVRVFTKICMPPRSLSTKWRVDSFWMS*

Sequence

>CNT30399039
AAGATGTAATTGCCACAAAGTACCATATAGTCGAACTAACAAATGCAAGGTACAATATTCATATGAATAGAGATGAAATGCATCAGATAGAAGCAAACAA
AAGAAAACACAGGATAACTCGCAGCTGCAGACACAATTCAGGGCTCACTTATTTATCAAGTTCACCAAAGCTGTTCACAACAGCAGCAATTCTCAAAAAC
AACCGAACATAACGATGCATCACACTACGGTAGAAACATAGAAACGACCAGGACGACAGACACAGGCACCATTGGAGGACATATCAAAGACACAAGACCT
GTGAACCCAACCCACAGAGAAGCCGCTCCATTGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTAT
AGTCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGAC
GTTGTCGATGGTGTCCGAGGACTCAACCTCCAGGGTGATGGTCTTGTCGGTGAGGGTCTTCACAAAGATCTGCATGCCACCACGGAGCCTTAGCACCAAG
TGGAGGGTGGACTCCTTCTGGATGTCGTAGTCAGCCAGGGTGCAGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGC
CCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTGGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGCTCTTCACAAAGATCTG
CAT