Detailed information on CNT30398985


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316024Triticum turgidumCorylus avellana31.4225.2283.25203forward
CNT30378927Triticum turgidumManihot esculenta31.4232.7982.27203forward
CNT30443444Triticum turgidumAegilops tauschii63.9344.3699.03413forward
CNT30668234Triticum turgidumTriticum dicoccoides31.5834.6999.51204forward
CNT30311670Triticum turgidumCamelina sativa26.3230.8582.94170forward
CNT30154935Triticum turgidumPrunus persica31.8948.4782.52206forward

Expression of CNT30398985

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MDCNHLQRMGCSLTGRVRMPCPQHMVRTEHP*

>peptide 2 (87 aa)
LGCTREKWGCMMATLGCKMATSGCMQEMSDCMLARSDYKPVMLDYSSEMWGCSLVMLGCSSEMWGCSWAMQGCMMEKWDCNHVLALG*

>peptide 3 (34 aa)
MACCSIWSFRYNPQPPVPIGASWPSIMFSVTPLR*

Sequence

>CNT30398985
TGTTGGGCTGTACGAGGGAGAAGTGGGGCTGTATGATGGCGACGTTGGGCTGTAAGATGGCGACGTCGGGCTGTATGCAGGAGATGTCGGACTGTATGCT
GGCGAGGTCGGACTATAAACCGGTGATGTTGGACTATAGCTCGGAGATGTGGGGCTGTAGCTTGGTGATGTTGGGCTGTAGCTCGGAGATGTGGGGCTGT
AGCTGGGCGATGCAGGGCTGTATGATGGAGAAGTGGGACTGTAACCATGTCCTGGCCCTGGGCTGAACACCGGAGAAGATGGACTGTAACCACCTCCAGA
GGATGGGCTGTAGTTTGACGGGACGGGTGAGAATGCCATGCCCCCAACATATGGTGAGAACTGAGCATCCGTAATTGGGGAAGCCCTGAAATTTGGACTC
AACATTGGTGACATCATTCCTCCATCACGGTACGGTGTCGCGGACATGGGTGAACGCGCTGGTGTCATGCCATAGTCCAGACCTTCAACATAGCTTGGGA
GTTGAAGCTCAATGGCCTGCTGCAGCATCTGGTCATTCAGATACAATCCACAGCCTCCTGTACCAATAGGAGCAAGCTGGCCAAGCATAATGTTCTCAGT
CACACCTCTCAGGTAATCAGATTCCGCATATACAGCAGCATCAAGC