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Detailed information on CNT30398448


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30443030Triticum turgidumAegilops tauschii91.5155.1194.5291forward
CNT30116996Triticum turgidumOryza nivara22.9621.9286.373forward

Expression of CNT30398448

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MARERRWPSTCTPRRASSRTRRRPHRRPRRRTCRAWP

>peptide 2 (29 aa)
MKSIYICMHARISAQSMCRAVYTRVAPRS*

Sequence

>CNT30398448
ACTAAAAGCATTGCATTCACACTTTCATATACCACTTATATATCATCAGTAGTTCTGGTTAAATAGGAGAAGGGGAAGGGAGAGAGAATTTAAGTACACG
GTAGAAAATGAAGAGCATATATATCTGCATGCACGCACGAATCTCGGCGCAATCCATGTGCCGCGCCGTGTACACACGGGTTGCACCGAGATCCTAGGTC
CGGGAATGGCGCGGGAGCGACGGTGGCCTAGTACTTGTACCCCGCGACGTGCAAGCTCTCGGACGCGGCGGCGTCCCCACCGGCGGCCGCGCCGCCGTAC
TTGCCGAGCGTGGCCTCG