Detailed information on CNT30398379


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30304994Triticum turgidumTriticum aestivum10076.2798.132407forward
CNT30681623Triticum turgidumTriticum urartu34.5735.3994.23832forward

Expression of CNT30398379

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVAWWPRFHGRLDDHNGRCKLDASSTGKGER*

>peptide 2 (48 aa)
MLAITSPIAFGNSTYNVDSKVNTSNWHVHVHFNFKRLTNKILPDLVEC*

>peptide 3 (42 aa)
MRWWHGGRDSTGGWTITMEDANSTQAQQAKVRDDSLLYLPLC*

>peptide 4 (45 aa)
MSWYPAVHANYNYVHVVMGKQLVVPKAYRVAILADCNSQHLVVEA*

>peptide 5 (29 aa)
MNLVPIRPHLARELNLSYTSNISKEITSK*

>peptide 6 (32 aa)
SFHWEGGFRLGEIHRSGQSPAARPELYRAVRL*

>peptide 7 (34 aa)
MLAIRSLMTPQKSTCSVNQKVNDPYMFVLILTIN*

>peptide 8 (30 aa)
MMQKHNHHSYSCMLFLDLFAKQFVKSISIT*

Sequence

>CNT30398379
ACTCATTCCACTGGGAGGGAGGATTTCGACTAGGTGAGATACATCGTTCAGGTCAATCGCCGGCGGCAAGACCAGAGCTGTATAGGGCCGTCCGTCTCTG
ACTCGCTTCGCCGCCCGGAGCTGTCACGGCTAGCGCCACCCGTCTCCGCCAGGAGCCGCGGGGTTGGAAGGCGGTAAGGCAGGACTCGCCACCGGGGCCG
TTCTTTGCTGGAGGCAAGGTGGGATCCGTCACGGCTAGCTCCGCTCGGCTAAGGCGCGCTGCACCACGCTCGGCCGTGGACTTGGCCGGCGGCAAGACGG
GGCCCGTCGCGACTGTTGTCGTCCGGCTCCGGCACACCCAAGGCCAGCCCAAGGTTGTGGCTGACCCGCTCTCTATGAGATGGTGGCATGGTGGCCGAGA
TTCCACGGGAGGTTGGACGATCACAATGGAAGATGCAAACTCGACGCAAGCTCAACAGGCAAAGGTGAGAGATGATTCACTGCTTTATCTACCTCTGTGC
TAGTACCTAATTAGCTCTCAGCTTTCCCGCAAAAAATAAAATAAAATAGCTCTCAGCTATATACGTATGCGAGCTCTTTCTTTACTGGTAGCAATGTACT
AGCTCTGTACTACTAGTAGCTATGTACTGAACTCTCAAGTATGCAAGCTATGTACTCTCCTCTGCTCTTCAGTCATACAGTGCATGGGAAATCAGAAATT
GGTGAAAGCACCTTTTAATGAATTTAGTGCCTATAAGACCACATTTAGCTAGGGAACTAAACCTCAGTTACACATCTAACATATCAAAAGAAATAACCAG
CAAATAATCCATATATTTTTATTTGAGCATAAAACCATTGTGCATCTAACATCAAAAGGAACGGTAAGATACATTATTACATCTCAAGGGAACTGTCTTG
TAGAGCAACCCTGAGATACAAAGTTTACATATAGAGCTATTTAAAAGTGTTTATCTTGTATGTGATTTGATTGGCTACCCAAGACCTGGAAGAACAAAGA
AATGATTTCTTAGGAGATATAAACTTCATTTGGGAATATGACTTGCAAGTGAACAATACCTGAATTGGCTGCTGGTCATTTTTGAGATGTTGGCCATCAC
GAGTCCGATAGCATTTGGGAACTCTACATACAATGTTGATTCAAAAGTCAACACAAGCAATTGGCATGTGCATGTTCATTTTAATTTCAAGCGATTAACT
AATAAAATTCTACCCGACTTGGTTGAGTGCTAGTTGGCGGCTGGTGATTATGAGATGTTGGCCATCCGGAGTCTGATGACACCACAAAAGTCTACATGTA
GTGTTAATCAAAAAGTAAATGACCCGTACATGTTCGTCTTAATTTTAACAATTAACTAAATAAACATACATGACTCGGTTGAATGTTATGATAGATATAT
GGTTGTTGTGGTCGCAAGCCAAGTAACTGTTGAAAAGTAGTAGTGCTTGCCGGTGATAGTGGAGGCAAGCCATGCTGTAATACTTGCAAATTATAGTTCT
CAGGTTGTGGTACCGATGTCATGGTACCCAGCAGTACATGCAAATTATAATTATGTGCATGTGGTAATGGGGAAACAACTTGTGGTGCCGAAGGCATATC
GGGTGGCAATACTTGCAGATTGTAATTCGCAACATTTGGTAGTGGAGGCATAGCATGCTGCAATACTTGCAAATTGTAATTAGCAGCATTTGGTAGTGGA
GGCATAGCGTGCTGTAATACTTGCAAATTGTAGTTCTCATTTGATATGCTGAAGCTAGGATTTGGTCTAGATGATGCAGAAGCACAATCACCACTCTTAT
TCTTGCATGTTGTTCCTTGACCTATTTGCAAAACAATTTGTCAAATCTATTTCAATAACCTAACCAGATATTTATTTAGCTATTTCTTGTGGAATACCAT
ACCTTTCTTATTACATTTATTCTTATTGTTCAGCTCCAGTCCAGATTTAATCCTCTTGTTGCTATTTCCTTGTTCTTTTCTCTTTATTCCCTGTACTTGA
CTACATTCTCAAGGTTGCATTGAACTGGTTGCTTCTCTATGAATACATTCTCAATGTTGCATTCAACTGGTTCCTTCTCTGCTTGTTTATGATTTGGTGA
TATCTTTTGATTGATTCCCATGTAAAATTTGGTCCACCTTTTCCATTAGTTCAATTGGCATACTTTGCAGTAGTGCATATGCCTGTTTGTTTGTTGCTGC
TTTTCTCACAATATTATTGTAAGTGCGGCATAATGATCCATACTGCCTAGCTAGCATAACTCTTGTATCTTCATCATCACTGCACTTTTGAATTGCCTGT
GAGGGCCCTGATTTTGCTTGCCTTGTCCATCTTTTCAAGATATATTCCGGTGCCAGCTCCTTTATATTGTTGTGGTCCAACACCTTCAATGCCTGATGAC
ACAATAC