Detailed information on CNT30398156


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191518Triticum turgidumSecale cereale20.7599.3988.31325reverse complement

Expression of CNT30398156

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MQGMASNNARGNEERATARCSDGYGESEITQVN*

>peptide 2 (36 aa)
MPWPGLMSLRVGVRACTMVAYGYICLMTKSNLRHLY*

>peptide 3 (37 aa)
MMCFAFCLQLTCMEGSTYFLETVWRASFTRRRYTLML*

>peptide 4 (43 aa)
MAKKPSGDARRALHRPFVRIARPVNHVVVVVVDREVYPARGGC*

>peptide 5 (51 aa)
MHLYFSLNLFSFCHRTTLFLFKHPPPGEDPTSLSEPTLRHIRSYMACEPSP*

>peptide 6 (36 aa)
QTVHVFYSWKEINPPPLNEAPLSPLPLVAPRLILSS*

Sequence

>CNT30398156
CGCAAACCGTACACGTATTTTATAGCTGGAAAGAAATAAATCCTCCGCCGCTCAACGAGGCTCCCCTCTCCCCTCTCCCTCTCGTTGCCCCTCGACTCAT
CCTCTCATCGTGATCTCGTTCTCGTTCCCGGCGAGGAGAGAAAGGCATGGCGAAGAAGCCATCAGGAGATGCTCGTCGGGCGCTGCACCGGCCGTTTGTG
CGCATCGCACGGCCGGTCAACCACGTCGTCGTCGTCGTCGTAGATCGCGAGGTCTACCCGGCTAGGGGCGGCTGCTGATGGGGCGGATCCGCGGCCAGGC
TCGACGGGGAGCACGGCACGATGCAAGGAATGGCTTCAAACAACGCAAGAGGCAATGAAGAAAGGGCTACGGCCAGGTGTTCTGATGGTTATGGAGAAAG
TGAGATAACCCAAGTAAATTAACTGGTGGAGGAAGACAACGGACCTGTGTTGAGAATGCAATTCTGAAAGCAAAAACTCTTAGTTTGGACTCGACACGAG
GAACTTTCATTAGCTCCAGGAAAAACTACAGCAAAGTTTAAATCCTCCATCAGTATATTCAAAGTGGTGCACCATATGTAACCAAAATATTAGACCAACC
TGTTCACATTTTCCAAGCATTTCTTTATTGCCGTTGTAGTTCTGAGCTCATGATGAAAAGGACAGCGATTTAGGACAAAACAACATCTTATGTTTGTTGA
TCGTTGATGATGTGTTTTGCATTTTGTCTGCAGCTAACCTGTATGGAGGGGTCAACGTACTTCCTGGAGACGGTTTGGAGAGCCAGTTTTACTCGAAGGA
GATACACACTGATGCTGTAAACCTCAGTGTAAAGAAGGGTCCAAATAAGCTCCATCCGCACAACGATGCCATGGCCAGGGCTGATGTCATTAAGAGTGGG
AGTTAGGGCATGTACAATGGTGGCATATGGATACATATGCCTCATGACAAAAAGTAATTTGAGGCATCTATATTAACTTCTTCTCTTCAATGTAAGCTAT
CACTAGTGGGCCTCATTAAGAAATAGAAAAATAAAGAGTCTATTACATATGCATCTCTACTTTTCACTCAACCTTTTCAGCTTTTGTCACCGGACCACAC
TTTTTCTGTTCAAGCACCCGCCTCCTGGAGAGGATCCCACTTCCCTATCCGAACCTACTTTACGTCATATCCGATCCTACATGGCATGCGAGCCATCACC
TTGAGGCTATGCATTGTACATGCCCTTATGGTGGTATGACAATTGTCCACCCATCACCAACTGTCACTAAGGATGTAGCATAGAAGTAGATCAGGAAGAC
CTCGGGGCCACTATGCACAATATTTTTATCAGGTGTTGTTTCCAATGACATCTGAAGTTATTTGCTCCGGGGTTTGATCATCACGCCTGTTTGCACAGTT
ACCCAGTACCCCAGTTTTTGCACTAAATGTATGGTCTTCTTTGACCTGACTATCTGAAAGTGAAGTTTTTGTAATAGAACTATAATGATTCGTATGGTGA
TCTATGGCCTGACTATTGCTATATATGTGCTATATATGACTACTGCTGAAAGTAATAATGTCTTTT