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Detailed information on CNT30397788


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 5e-97

BLAST vs NONCODE:
NONGMAT000502, E-value = 2e-59

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30722378Triticum turgidumTriticum spelta90.610097.86607forward

Expression of CNT30397788

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICMPPRRRSTRWRVDSFWML*

>peptide 2 (75 aa)
TYSQTRTAKANEHRHITSKLTYSYLTVQMYLQLFAPNHRTRWSIKAADTVRLHTNETSLEQRRHRVQQQQQQVER*

Sequence

>CNT30397788
CACATATAGCCAGACAAGAACTGCAAAGGCAAATGAGCACAGGCACATTACTTCAAAGTTGACTTATTCATACTTAACGGTACAGATGTACCTGCAACTG
TTTGCACCAAACCACAGGACTCGATGGTCCATTAAAGCAGCAGACACAGTACGACTTCACACAAACGAGACATCACTTGAACAAAGGCGACACAGGGTAC
AGCAGCAGCAGCAGCAGGTCGAACGATAGGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC
TAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCA
ATGGTGTCAGAGCTCTCAACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATGCCACCACGCAGACGCAGCACCAGGTGGAGGG
TGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCGTCCTCCAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT
GTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCC